RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 GDF11O95390 407 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 ASNSP08243 561 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 TOB1P50616 345 aaPredicted RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 GUCY1B3Q02153 619 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 ICA1Q05084 483 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 KLHL40Q2TBA0 621 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 KIAA1755Q5JYT7 1200 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 NOL9Q5SY16 702 aaKnown RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 MYSM1Q5VVJ2 828 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 GALNT17Q6IS24 598 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 RASGRP2Q7LDG7 609 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 DAGLBQ8NCG7 672 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 ACER1Q8TDN7 264 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 LEO1Q8WVC0 666 aaPredicted RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 ZKSCAN4Q969J2 545 aaPredicted RBP9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 HOOK2Q96ED9 719 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 WRNIP1Q96S55 665 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 JMJD4Q9H9V9 463 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 GABRQQ9UN88 632 aa9.3□□□□□ -0.92
AP001042.1-201ENST00000416842 UNC80Q8N2C7 3258 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 ESYT2A0FGR8 921 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 BTBD18B2RXH4 712 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 GOLGA6L22H0YM25 854 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 STXBP3O00186 592 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 PDHXO00330 501 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 MPHOSPH10O00566 681 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 NDUFB10O96000 172 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 KRT85P78386 507 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 PTPAQ15257 358 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 TTBK2Q6IQ55 1244 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 ANKRD23Q86SG2 305 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 NOSTRINQ8IVI9 506 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 ADGRF4Q8IZF3 695 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 GPT2Q8TD30 523 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 OXER1Q8TDS5 423 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 DIS3LQ8TF46 1054 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 USP28Q96RU2 1077 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 ZNF341Q9BYN7 854 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 ZMYND12Q9H0C1 365 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 POLR3EQ9NVU0 708 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 CFAP45Q9UL16 551 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 KCNJ14Q9UNX9 436 aa9.29□□□□□ -0.92
AP001042.1-201ENST00000416842 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 hCG_1642624A0A1W2PR95 340 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ADAMTS3O15072 1205 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ADCY3O60266 1144 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 GADD45BO75293 160 aaPredicted RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 YEATS4O95619 227 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 TFRCP02786 760 aaKnown RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 BCRP11274 1271 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ELNP15502 786 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 XBP1P17861 261 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 FCGRTP55899 365 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 UBE2HP62256 183 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 MOGSQ13724 837 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 TRIM29Q14134 588 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 SLC39A14Q15043 492 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 LRIT3Q3SXY7 679 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 TEX2Q8IWB9 1127 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 DIS3L2Q8IYB7 885 aaKnown RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 C7orf61Q8IZ16 206 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ZNF713Q8N859 430 aaPredicted RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 LINC00301Q8NCQ3 95 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 PGBD1Q96JS3 809 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ZNF396Q96N95 335 aaPredicted RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 DEFB118Q96PH6 123 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 VCPKMTQ9H867 229 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 ZMYND8Q9ULU4 1186 aaPredicted RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 BAZ2BQ9UIF8 2168 aaKnown RBP9.28□□□□□ -0.92
AP001042.1-201ENST00000416842 PHIPQ8WWQ0 1821 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 FAM237AA0A1B0GTK4 181 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 ZBTB5O15062 677 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 EDIL3O43854 480 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 PPP1R11O60927 126 aaPredicted RBP9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 INHAP05111 366 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 BMP3P12645 472 aa9.27□□□□□ -0.93
AP001042.1-201ENST00000416842 PTPRAP18433 802 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms