RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
LINC01888-201ENST00000415138 USP17L5A8MUK1 530 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 PHF20L1A8MW92 1017 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 ZBTB48P10074 688 aaPredicted RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 PCP11498 1178 aaKnown RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 ATP2B1P20020 1258 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 SSTR3P32745 418 aaPredicted RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 HAND2P61296 217 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 PPATQ06203 517 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 NOGQ13253 232 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 NOL9Q5SY16 702 aaKnown RBP10.98□□□□□ -0.65
LINC01888-201ENST00000415138 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 OTUD7BQ6GQQ9 843 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 TATDN1Q6P1N9 297 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 WNK4Q96J92 1243 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 CLMNQ96JQ2 1002 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 NUB1Q9Y5A7 615 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 ZHX2Q9Y6X8 837 aa10.98□□□□□ -0.65
LINC01888-201ENST00000415138 MYH4Q9Y623 1939 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 TSPY2A6NKD2 308 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 H0YHG0 523 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
LINC01888-201ENST00000415138 GH2P01242 217 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 SLURP2P0DP57 97 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
LINC01888-201ENST00000415138 SHMT1P34896 483 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 GTF2A2P52657 109 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 INHBEP58166 350 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 PTH1RQ03431 593 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 GABPAQ06546 454 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 SREBF2Q12772 1141 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 ZC3H12AQ5D1E8 599 aaKnown RBP10.97□□□□□ -0.65
LINC01888-201ENST00000415138 AKNAD1Q5T1N1 836 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 TMEM179Q6ZVK1 233 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 TXLNBQ8N3L3 684 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 MAP4K1Q92918 833 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 REPIN1Q9BWE0 567 aaKnown RBP10.97□□□□□ -0.65
LINC01888-201ENST00000415138 KRT23Q9C075 422 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 CNNM2Q9H8M5 875 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 SNCAIPQ9Y6H5 919 aa10.97□□□□□ -0.65
LINC01888-201ENST00000415138 DDX49Q9Y6V7 483 aaKnown RBP10.97□□□□□ -0.65
LINC01888-201ENST00000415138 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 MANSC4A6NHS7 340 aaPredicted RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 CTIFO43310 598 aaKnown RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 PRDM1O75626 825 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 TPM3P06753 285 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 PTPRAP18433 802 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ERCC3P19447 782 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 MAP2K2P36507 400 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 VEGFBP49765 207 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 NT5C2P49902 561 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ZNF445P59923 1031 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 TFAP4Q01664 338 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 PPIL2Q13356 520 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 SNAPC2Q13487 334 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 RALYLQ86SE5 291 aaKnown RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 RASAL3Q86YV0 1011 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ZNF280CQ8ND82 737 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ESR2Q92731 530 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ZBTB9Q96C00 473 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 GZF1Q9H116 711 aaPredicted RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 SH2D4AQ9H788 454 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 DNAJC18Q9H819 358 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 TMOD4Q9NZQ9 345 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 JRKLQ9Y4A0 524 aa10.96□□□□□ -0.65
LINC01888-201ENST00000415138 RBM8AQ9Y5S9 174 aaKnown RBP10.96□□□□□ -0.65
LINC01888-201ENST00000415138 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CXCL11O14625 94 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 RAD21O60216 631 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 SETSIPP0DME0 302 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CETPP11597 493 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 AKR1B1P15121 316 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CYP2C19P33261 490 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 KIF23Q02241 960 aaPredicted RBP10.95□□□□□ -0.66
LINC01888-201ENST00000415138 SPP2Q13103 211 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 MYBPC2Q14324 1141 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 FASTKD5Q7L8L6 764 aaKnown RBP10.95□□□□□ -0.66
LINC01888-201ENST00000415138 IQCA1Q86XH1 822 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 STAG1Q8WVM7 1258 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 LSG1Q9H089 658 aaKnown RBP10.95□□□□□ -0.66
LINC01888-201ENST00000415138 IL25Q9H293 177 aa10.95□□□□□ -0.66
LINC01888-201ENST00000415138 CCL15-CCL14A0A0B4J2E2 113 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 ERICH2A1L162 156 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 TRIM75PA6NK02 468 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 C19orf81C9J6K1 198 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms