RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ERAP2Q6P179 960 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 EP400NLQ6ZTU2 488 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 ELOA2Q8IYF1 753 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 LRRC56Q8IYG6 542 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 CLASRPQ8N2M8 674 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 TEX9Q8N6V9 391 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 JMYQ8N9B5 988 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 FBXO41Q8TF61 875 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 RNF34Q969K3 372 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 PPP1R16BQ96T49 567 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 DUSP9Q99956 384 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 TRIM6Q9C030 488 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 NIF3L1Q9GZT8 377 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 SLKQ9H2G2 1235 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 CLEC4MQ9H2X3 399 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 RC3H2Q9HBD1 1191 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 LRRC4CQ9HCJ2 640 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 PTPRHQ9HD43 1115 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 NGRNQ9NPE2 291 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 MBNL3Q9NUK0 354 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 GTF2A1LQ9UNN4 478 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 KNSTRNQ9Y448 316 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 LRRC10BA6NIK2 292 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 EIF1AYO14602 144 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 CCP110O43303 1012 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 NDUFB5O43674 189 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 CPNE3O75131 537 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 MSL3P1P0C860 447 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ZSCAN22P10073 491 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ADH5P11766 374 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 NCAM1P13591 858 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ENPP1P22413 925 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 MAOBP27338 520 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 OAS2P29728 719 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 TNNI2P48788 182 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SOX4Q06945 474 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 CCDC15Q0P6D6 951 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 EIF2B5Q13144 721 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SERINC3Q13530 473 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 MAP7Q14244 749 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 EAPPQ56P03 285 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SLC10A5Q5PT55 438 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 PRPF40BQ6NWY9 871 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ZCCHC8Q6NZY4 707 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 C16orf54Q6UWD8 224 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 PI16Q6UXB8 463 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF574Q6ZN55 896 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 MTERF4Q7Z6M4 381 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 RASSF3Q86WH2 238 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ANKLE2Q86XL3 938 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SPICE1Q8N0Z3 855 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 EPS8L3Q8TE67 593 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SH3TC2Q8TF17 1288 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 NELL1Q92832 810 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 CCDC74AQ96AQ1 378 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 TBC1D31Q96DN5 1066 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 GPR101Q96P66 508 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 RBCK1Q9BYM8 510 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 RWDD1Q9H446 243 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 C12orf49Q9H741 205 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SH3GLB2Q9NR46 395 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SMC4Q9NTJ3 1288 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
SF3B1-203ENST00000414174 SUPT16HQ9Y5B9 1047 aaKnown RBP4.25□□□□□ -1.73
SF3B1-203ENST00000414174 ANKRD18BA2A2Z9 1011 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 EIF4EBP3O60516 100 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-203ENST00000414174 IDEP14735 1019 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 KIF5BP33176 963 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 EPHB1P54762 984 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 COX10Q12887 443 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 GRM2Q14416 872 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 FXNQ16595 210 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 SLC4A8Q2Y0W8 1093 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 FILIP1LQ4L180 1135 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 ARSHQ5FYA8 562 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 FAM83BQ5T0W9 1011 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 OGFOD3Q6PK18 319 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 CCBE1Q6UXH8 406 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF765Q7L2R6 523 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 TMC7Q7Z402 723 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 SNX32Q86XE0 403 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 MCF2L2Q86YR7 1114 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 IFNL2Q8IZJ0 200 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 TMEM87AQ8NBN3 555 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 PHC3Q8NDX5 983 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 TDRD7Q8NHU6 1098 aaKnown RBP4.24□□□□□ -1.73
SF3B1-203ENST00000414174 C17orf50Q8WW18 174 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 ALKBH8Q96BT7 664 aaKnown RBP4.24□□□□□ -1.73
SF3B1-203ENST00000414174 SELENOOQ9BVL4 669 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 ABCG4Q9H172 646 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 LMCD1Q9NZU5 365 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 PCSK1NQ9UHG2 260 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 TAGLN3Q9UI15 199 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 VAV3Q9UKW4 847 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms