RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
HCG27-202ENST00000414008 USP17L12C9JPN9 530 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 USP17L21D6R901 530 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 HIP1O00291 1037 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 F11P03951 625 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 APPP05067 770 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
HCG27-202ENST00000414008 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
HCG27-202ENST00000414008 CYP2D6P10635 497 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 GSPT1P15170 499 aaKnown RBP11.48□□□□□ -0.57
HCG27-202ENST00000414008 CAP2P40123 477 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 TM4SF4P48230 202 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 INHBEP58166 350 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 PPATQ06203 517 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 SREBF2Q12772 1141 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 SIX5Q8N196 739 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
HCG27-202ENST00000414008 MYH7P12883 1935 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 A0A0D9SFI3 127 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 PTPRAP18433 802 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 GTF2A2P52657 109 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 GABPAQ06546 454 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 NMIQ13287 307 aaPredicted RBP11.47□□□□□ -0.57
HCG27-202ENST00000414008 PPIL2Q13356 520 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
HCG27-202ENST00000414008 C12orf60Q5U649 245 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 CCDC129Q6ZRS4 1044 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 TRIM22Q8IYM9 498 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 NACAP1Q9BZK3 213 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 DIAPH3Q9NSV4 1193 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
HCG27-202ENST00000414008 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
HCG27-202ENST00000414008 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 PLA2G4AP47712 749 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 TDO2P48775 406 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 SBK1Q52WX2 424 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 TATDN1Q6P1N9 297 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 FOXR1Q6PIV2 292 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 CWC27Q6UX04 472 aaKnown RBP11.46□□□□□ -0.57
HCG27-202ENST00000414008 SKAP1Q86WV1 359 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 IFNL3Q8IZI9 196 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 GINM1Q9NU53 330 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 SWAP70Q9UH65 585 aa11.46□□□□□ -0.57
HCG27-202ENST00000414008 CDK5RAP2Q96SN8 1893 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 MINDY4BA8MYZ0 360 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 M0R2N6 131 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 CXCL11O14625 94 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 CA12O43570 354 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 ASNSP08243 561 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 CETPP11597 493 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 CERKLQ49MI3 558 aaPredicted RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 DYNLL2Q96FJ2 89 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 NAPBQ9H115 298 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 EPB41L4AQ9HCS5 686 aaPredicted RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 CUEDC1Q9NWM3 386 aaPredicted RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 SCHIP1Q9P0W5 487 aaPredicted RBP11.45□□□□□ -0.58
HCG27-202ENST00000414008 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
HCG27-202ENST00000414008 CCDC171Q6TFL3 1326 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 FOXN1O15353 648 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 TRPA1O75762 1119 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 GDF11O95390 407 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 RFX1P22670 979 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 SHMT1P34896 483 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 CDK8P49336 464 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 JAG1P78504 1218 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 CCL15Q16663 113 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 VPS53Q5VIR6 699 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 OTUD7BQ6GQQ9 843 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 C16orf86Q6ZW13 317 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 ZNF589Q86UQ0 364 aaPredicted RBP11.44□□□□□ -0.58
HCG27-202ENST00000414008 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
HCG27-202ENST00000414008 PGBD3Q8N328 593 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 SLC44A5Q8NCS7 719 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 GPAMQ9HCL2 828 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 CABP5Q9NP86 173 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.44□□□□□ -0.58
HCG27-202ENST00000414008 ZBTB21Q9ULJ3 1066 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 KCNH4Q9UQ05 1017 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 MYH1P12882 1939 aa11.44□□□□□ -0.58
HCG27-202ENST00000414008 PCNTO95613 3336 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 FOXP2O15409 715 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 GH2P01242 217 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
HCG27-202ENST00000414008 CHMLP26374 656 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
HCG27-202ENST00000414008 SEC13P55735 322 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 SPP2Q13103 211 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms