RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 TNFAIP2Q03169 654 aa28.87■■■□□ 2.21
AC005540.1-201ENST00000413911 TKFCQ3LXA3 575 aa28.87■■■□□ 2.21
AC005540.1-201ENST00000413911 PDGFCQ9NRA1 345 aa28.87■■■□□ 2.21
AC005540.1-201ENST00000413911 MROH7Q68CQ1 1323 aa28.87■■■□□ 2.21
AC005540.1-201ENST00000413911 RANBP6O60518 1105 aaKnown RBP28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 FGRP09769 529 aa28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 ANKRD45Q5TZF3 282 aa28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 TTBK2Q6IQ55 1244 aa28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 CYP39A1Q9NYL5 469 aa28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 LCTP09848 1927 aa28.86■■■□□ 2.21
AC005540.1-201ENST00000413911 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 CSF2RAP15509 400 aa28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 SMPD1P17405 629 aa28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 GRIN2CQ14957 1233 aa28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 TMEM240Q5SV17 173 aa28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 CXCL17Q6UXB2 119 aa28.85■■■□□ 2.21
AC005540.1-201ENST00000413911 TMEM265A0A087WTH1 108 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 ASB14A6NK59 587 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 ORC4O43929 436 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 CD4P01730 458 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 DNAJB2P25686 324 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 PPP4R3BQ5MIZ7 849 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 TAPT1Q6NXT6 567 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 NOL8Q76FK4 1167 aaKnown RBP28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 SLC43A3Q8NBI5 491 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 EVI5LQ96CN4 794 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 FAM227BQ96M60 508 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 PPP1R12CQ9BZL4 782 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 GRIN2DO15399 1336 aa28.84■■■□□ 2.21
AC005540.1-201ENST00000413911 FOSL2P15408 326 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 PDE1AP54750 535 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 RRP1P56182 461 aaKnown RBP28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 ALX1Q15699 326 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 RASIP1Q5U651 963 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 EEPD1Q7L9B9 569 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 TLK2Q86UE8 772 aa28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 FBXO16Q8IX29 292 aaPredicted RBP28.83■■■□□ 2.21
AC005540.1-201ENST00000413911 CHD9Q3L8U1 2897 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 A0A0D9SFI3 127 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 GRXCR1A8MXD5 290 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 ACRP10323 421 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 SLC16A2P36021 539 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 PPIGQ13427 754 aaKnown RBP eCLIP28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 CRBNQ96SW2 442 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 HELLSQ9NRZ9 838 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 CCPG1Q9ULG6 757 aa28.82■■■□□ 2.2
AC005540.1-201ENST00000413911 DYNC1LI2O43237 492 aaPredicted RBP28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 FGAP02671 866 aa28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 ICAM1P05362 532 aa28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 CYP2C18P33260 490 aa28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 FSCN1Q16658 493 aaKnown RBP28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 CCDC96Q2M329 555 aa28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 NSMFQ6X4W1 530 aa28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 RANBP17Q9H2T7 1088 aaKnown RBP28.81■■■□□ 2.2
AC005540.1-201ENST00000413911 PBX2P40425 430 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 BTNL9Q6UXG8 535 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 ZNF365Q70YC5 407 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 MORC4Q8TE76 937 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 DCAF4Q8WV16 495 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 TMEM47Q9BQJ4 181 aa28.8■■■□□ 2.2
AC005540.1-201ENST00000413911 UMODL1Q5DID0 1318 aa28.79■■■□□ 2.2
AC005540.1-201ENST00000413911 ZNF589Q86UQ0 364 aaPredicted RBP28.79■■■□□ 2.2
AC005540.1-201ENST00000413911 TMEM199Q8N511 208 aa28.79■■■□□ 2.2
AC005540.1-201ENST00000413911 FRMPD2Q68DX3 1309 aaPredicted RBP28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 NFIBO00712 420 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 TLR3O15455 904 aaKnown RBP28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 ITGA7Q13683 1181 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 BAATQ14032 418 aaPredicted RBP28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 RRP12Q5JTH9 1297 aaKnown RBP28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 IQSEC1Q6DN90 963 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 TIFAQ96CG3 184 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 PBX4Q9BYU1 374 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 ZNF576Q9H609 170 aa28.78■■■□□ 2.2
AC005540.1-201ENST00000413911 PSMC6P62333 389 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 MCMDC2Q4G0Z9 681 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 SYDE2Q5VT97 1194 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 USP38Q8NB14 1042 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 AP5M1Q9H0R1 490 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 GPCPD1Q9NPB8 672 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 TOMM22Q9NS69 142 aa28.77■■■□□ 2.2
AC005540.1-201ENST00000413911 CABYRO75952 493 aa28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 HSPD1P10809 573 aaKnown RBP28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 TOP1P11387 765 aaKnown RBP28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 NMIQ13287 307 aaPredicted RBP28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 HDAC1Q13547 482 aaPredicted RBP28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 TRPV6Q9H1D0 765 aa28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 TCP11L1Q9NUJ3 509 aa28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 CXXC1Q9P0U4 656 aaPredicted RBP28.76■■■□□ 2.19
AC005540.1-201ENST00000413911 HAND2P61296 217 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 KIAA1211Q6ZU35 1233 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 CLEC4DQ8WXI8 215 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 VTA1Q9NP79 307 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 IL23AQ9NPF7 189 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 Q9Y3F1 56 aa28.75■■■□□ 2.19
AC005540.1-201ENST00000413911 ALDH5A1P51649 535 aaPredicted RBP28.74■■■□□ 2.19
AC005540.1-201ENST00000413911 HIPK3Q9H422 1215 aa28.74■■■□□ 2.19
AC005540.1-201ENST00000413911 ZBTB47Q9UFB7 747 aaPredicted RBP28.74■■■□□ 2.19
AC005540.1-201ENST00000413911 B4GALT4O60513 344 aa28.73■■■□□ 2.19
AC005540.1-201ENST00000413911 PDHBP11177 359 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms