RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PRDM12Q9H4Q4 367 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
LIMS2-210ENST00000413578 SLC1A4P43007 532 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 NOVP48745 357 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 TFAP4Q01664 338 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 PDE4BQ07343 736 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 ITGA7Q13683 1181 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 RAB30Q15771 203 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 FSCN1Q16658 493 aaKnown RBP14.46□□□□□ -0.09
LIMS2-210ENST00000413578 ZMYM1Q5SVZ6 1142 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 TMEM63BQ5T3F8 832 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 CCDC129Q6ZRS4 1044 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 PI4K2BQ8TCG2 481 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.09
LIMS2-210ENST00000413578 GPATCH3Q96I76 525 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 TRERF1Q96PN7 1200 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 GAS2L1Q99501 681 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-210ENST00000413578 NOC4LQ9BVI4 516 aaKnown RBP14.46□□□□□ -0.09
LIMS2-210ENST00000413578 SEZ6LQ9BYH1 1024 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 WNT8AQ9H1J5 351 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 HIPK3Q9H422 1215 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 PDGFCQ9NRA1 345 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 IL17RBQ9NRM6 502 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 CYP39A1Q9NYL5 469 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 YBX2Q9Y2T7 364 aaKnown RBP14.46□□□□□ -0.09
LIMS2-210ENST00000413578 Q9Y3F1 56 aa14.46□□□□□ -0.09
LIMS2-210ENST00000413578 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 CHD7Q9P2D1 2997 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 LRRC37A2A6NM11 1700 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 TNFRSF10AO00220 468 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 APPP05067 770 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 MCCP23508 829 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 MUM1L1Q5H9M0 696 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 RASGRP2Q7LDG7 609 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 NACAP1Q9BZK3 213 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 MCM3APO60318 1980 aa14.45□□□□□ -0.1
LIMS2-210ENST00000413578 B4GALT4O60513 344 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 FGBP02675 491 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
LIMS2-210ENST00000413578 IQSEC1Q6DN90 963 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 RCSD1Q6JBY9 416 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 KCTD1Q719H9 257 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 FBXO16Q8IX29 292 aaPredicted RBP14.44□□□□□ -0.1
LIMS2-210ENST00000413578 ASB2Q96Q27 587 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 NAPBQ9H115 298 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 THEGQ9P2T0 379 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 MSRAQ9UJ68 235 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 MYH4Q9Y623 1939 aa14.44□□□□□ -0.1
LIMS2-210ENST00000413578 NCOR1O75376 2440 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 DYNC1LI2O43237 492 aaPredicted RBP14.43□□□□□ -0.1
LIMS2-210ENST00000413578 SLC3A2P08195 630 aaKnown RBP14.43□□□□□ -0.1
LIMS2-210ENST00000413578 ALAS1P13196 640 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
LIMS2-210ENST00000413578 OTOP2Q7RTS6 562 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 OTUD7AQ8TE49 926 aaPredicted RBP14.43□□□□□ -0.1
LIMS2-210ENST00000413578 TRPV6Q9H1D0 765 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 MTIF3Q9H2K0 278 aaKnown RBP14.43□□□□□ -0.1
LIMS2-210ENST00000413578 VTA1Q9NP79 307 aa14.43□□□□□ -0.1
LIMS2-210ENST00000413578 ZEB2O60315 1214 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 NMT2O60551 498 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 ICAM1P05362 532 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 FGRP09769 529 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 CCL23P55773 120 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 SNAP25P60880 206 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 PSMC6P62333 389 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 DUSP28Q4G0W2 176 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
LIMS2-210ENST00000413578 PPM1EQ8WY54 764 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
LIMS2-210ENST00000413578 AP5M1Q9H0R1 490 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 ALDH8A1Q9H2A2 487 aaPredicted RBP14.42□□□□□ -0.1
LIMS2-210ENST00000413578 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
LIMS2-210ENST00000413578 INCENPQ9NQS7 918 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 STX8Q9UNK0 236 aa14.42□□□□□ -0.1
LIMS2-210ENST00000413578 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 BDP1A6H8Y1 2624 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 LOC102724159A0A0B4J2E5 919 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 RBM47A0AV96 593 aaKnown RBP14.41□□□□□ -0.1
LIMS2-210ENST00000413578 ERC2O15083 957 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 IKQ13123 557 aaPredicted RBP14.41□□□□□ -0.1
LIMS2-210ENST00000413578 PWP2Q15269 919 aaKnown RBP14.41□□□□□ -0.1
LIMS2-210ENST00000413578 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 SLC28A3Q9HAS3 691 aa14.41□□□□□ -0.1
LIMS2-210ENST00000413578 TSPY2A6NKD2 308 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 ORC4O43929 436 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 RABGGTBP53611 331 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 MRPS5P82675 430 aaKnown RBP14.4□□□□□ -0.1
LIMS2-210ENST00000413578 PURAQ00577 322 aaKnown RBP14.4□□□□□ -0.1
LIMS2-210ENST00000413578 CTDSPL2Q05D32 466 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 NSMFQ6X4W1 530 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 ADAMTS19Q8TE59 1207 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 SCLYQ96I15 445 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms