RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 UBXN1Q04323 297 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 ARHGAP29Q52LW3 1261 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 MRPL44Q9H9J2 332 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 SWAP70Q9UH65 585 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 TECP42680 631 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 C7orf25Q9BPX7 421 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 ABHD10Q9NUJ1 306 aa12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 KIF5CO60282 957 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 TADA3O75528 432 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 CYP26C1Q6V0L0 522 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 MYH1P12882 1939 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 AKR1B1P15121 316 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 LZTFL1Q9NQ48 299 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 MRFAP1Q9Y605 127 aa12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-202ENST00000412615 A0A1W2PQC6 194 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 BICDL2A1A5D9 508 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 TTLL1O95922 423 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 KRT9P35527 623 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 ADCY7P51828 1080 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 PMS1P54277 932 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 PDE4DQ08499 809 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 USP40Q9NVE5 1235 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 LGALS16A8MUM7 142 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 TMEM260Q9NX78 707 aa12.88□□□□□ -0.35
TRAFD1-202ENST00000412615 TRIM37O94972 964 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 CCNE1P24864 410 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 TXKP42681 527 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 ASIC1P78348 528 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 CALCRLQ16602 461 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 CSGALNACT2Q8N6G5 542 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 P2RX5Q93086 422 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 COA7Q96BR5 231 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 LRRC37AA6NMS7 1700 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 NPR1P16066 1061 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 DNM2P50570 870 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.353e-6■■■■□ 19.5
TRAFD1-202ENST00000412615 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 ERVK-24P63145 666 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
TRAFD1-202ENST00000412615 G3V3G9 751 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 SRGNP10124 158 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 TUBB2AQ13885 445 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 KRT222Q8N1A0 295 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 TUBB2BQ9BVA1 445 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 STK17AQ9UEE5 414 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 LUC7L2Q9Y383 392 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms