RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 GVINP1Q7Z2Y8 2422 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 CYP2D6P10635 497 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
LSM8-202ENST00000411938 PTGS1P23219 599 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 MTX1Q13505 466 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 SCN5AQ14524 2016 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 FAM47CQ5HY64 1035 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
LSM8-202ENST00000411938 DYNLL2Q96FJ2 89 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 FGD4Q96M96 766 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 TGS1Q96RS0 853 aaKnown RBP8.33□□□□□ -1.08
LSM8-202ENST00000411938 PRRX2Q99811 253 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 SLF1Q9BQI6 1058 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 CRNKL1Q9BZJ0 848 aaKnown RBP8.33□□□□□ -1.08
LSM8-202ENST00000411938 KATNBL1Q9H079 304 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 PRKAG3Q9UGI9 489 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 GNEQ9Y223 722 aaKnown RBP8.33□□□□□ -1.08
LSM8-202ENST00000411938 FPGT-TNNI3KV9GXZ4 949 aa8.33□□□□□ -1.08
LSM8-202ENST00000411938 MYO5AQ9Y4I1 1855 aaKnown RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 TET1Q8NFU7 2136 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 C19orf67A6NJJ6 358 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 ZBED4O75132 1171 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 BAIAP3O94812 1187 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 GNAI3P08754 354 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 SMPD1P17405 629 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 IRS1P35568 1242 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 ERVK-21P61565 698 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 CNTN2Q02246 1040 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 SUGP1Q8IWZ8 645 aaKnown RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 NEK9Q8TD19 979 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
LSM8-202ENST00000411938 PBXIP1Q96AQ6 731 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 ZNF512BQ96KM6 892 aaPredicted RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 RIOK1Q9BRS2 568 aaKnown RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 FBXO40Q9UH90 709 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 MUTYHQ9UIF7 546 aa8.32□□□□□ -1.08
LSM8-202ENST00000411938 COL4A4P53420 1690 aaPredicted RBP8.32□□□□□ -1.08
LSM8-202ENST00000411938 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 NCOR2Q9Y618 2525 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 PDE4AP27815 886 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 WDR5P61964 334 aaKnown RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 SLFN5Q08AF3 891 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 TCF15Q12870 199 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 HERC4Q5GLZ8 1057 aaPredicted RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 FAM117BQ6P1L5 589 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 RAD9AQ99638 391 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 BACH2Q9BYV9 841 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 API5Q9BZZ5 524 aaKnown RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 RAVER2Q9HCJ3 691 aaKnown RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 GPHNQ9NQX3 736 aaPredicted RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 PDGFCQ9NRA1 345 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 NOB1Q9ULX3 412 aaKnown RBP8.31□□□□□ -1.08
LSM8-202ENST00000411938 NOD1Q9Y239 953 aa8.31□□□□□ -1.08
LSM8-202ENST00000411938 TRIOO75962 3097 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PNMA6EA0A0J9YXQ4 647 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 LINC01553A4QN01 128 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 TMEM221A6NGB7 291 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 ASB14A6NK59 587 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 E9PSI1 815 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 M0R296 226 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PITPNM1O00562 1244 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 ATP2A1O14983 1001 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 MYL3P08590 195 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 DEFB103AP81534 67 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 BFSP2Q13515 415 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PKN1Q16512 942 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PTPROQ16827 1216 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 ALDH1L2Q3SY69 923 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 IQSEC1Q6DN90 963 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 EEPD1Q7L9B9 569 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 ERMP1Q7Z2K6 904 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 BMP8AQ7Z5Y6 402 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 RNF135Q8IUD6 432 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 TRMT2AQ8IZ69 625 aaKnown RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 PRPF38AQ8NAV1 312 aaKnown RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 CHST13Q8NET6 341 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 EDAQ92838 391 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 ATOH1Q92858 354 aaPredicted RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 KIFC2Q96AC6 838 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 PABPC5Q96DU9 382 aaKnown RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 MRPL38Q96DV4 380 aaKnown RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 ANTXR1Q9H6X2 564 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms