RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 LLPHQ9BRT6 129 aaKnown RBP19.26■□□□□ 0.67
GCFC2-202ENST00000409857 NID2Q14112 1375 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L15C9J2P7 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 BTBD19C9JJ37 291 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L13C9JLJ4 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L11C9JVI0 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L18D6R9N7 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L22D6RA61 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L17D6RBQ6 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L19D6RCP7 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L20D6RJB6 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 PLA2G6O60733 806 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 BMP3P12645 472 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 ME1P48163 572 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 USP17L24Q0WX57 530 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 APOA5Q6Q788 366 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 SYNE3Q6ZMZ3 975 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 CCDC73Q6ZRK6 1079 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 IFNL1Q8IU54 200 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 ENGASEQ8NFI3 743 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 RPAP3Q9H6T3 665 aaPredicted RBP19.26■□□□□ 0.67
GCFC2-202ENST00000409857 TRMT1Q9NXH9 659 aaKnown RBP19.26■□□□□ 0.67
GCFC2-202ENST00000409857 CAVIN2O95810 425 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 SKILP12757 684 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 GRM4Q14833 912 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 ASPRV1Q53RT3 343 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
GCFC2-202ENST00000409857 CATSPERGQ6ZRH7 1159 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 DNAJC5GQ8N7S2 189 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 MRFAP1L1Q96HT8 127 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 PAXBP1Q9Y5B6 917 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 RAD21O60216 631 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
GCFC2-202ENST00000409857 FAM83BQ5T0W9 1011 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 PNMA3Q9UL41 463 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
GCFC2-202ENST00000409857 KLF18A0A0U1RQI7 1052 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 ZNF543Q08ER8 600 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 AOPEPQ8N6M6 819 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 ZNF274Q96GC6 653 aaPredicted RBP19.24■□□□□ 0.67
GCFC2-202ENST00000409857 IGF2BP3O00425 579 aaKnown RBP eCLIP19.24■□□□□ 0.67
GCFC2-202ENST00000409857 CTAGE5O15320 804 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 PARP1P09874 1014 aaKnown RBP19.24■□□□□ 0.67
GCFC2-202ENST00000409857 OSBPP22059 807 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 PPP2R5BQ15173 497 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.24■□□□□ 0.67
GCFC2-202ENST00000409857 FEM1BQ9UK73 627 aa19.24■□□□□ 0.67
GCFC2-202ENST00000409857 V9GYY5 206 aaPredicted RBP19.24■□□□□ 0.67
GCFC2-202ENST00000409857 PDHXO00330 501 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 ZBTB43O43298 467 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 BTNL9Q6UXG8 535 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 PALM3A6NDB9 673 aaPredicted RBP19.23■□□□□ 0.67
GCFC2-202ENST00000409857 PDIA3P30101 505 aaKnown RBP19.23■□□□□ 0.67
GCFC2-202ENST00000409857 CCZ1BP86790 482 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 CCZ1P86791 482 aaPredicted RBP19.23■□□□□ 0.67
GCFC2-202ENST00000409857 FAM160B2Q86V87 743 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 NUP88Q99567 741 aaPredicted RBP19.23■□□□□ 0.67
GCFC2-202ENST00000409857 TANGO6Q9C0B7 1094 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 MAD2L2Q9UI95 211 aa19.23■□□□□ 0.67
GCFC2-202ENST00000409857 A0A1B0GVL5 298 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 KIF5BP33176 963 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 CTCFLQ8NI51 663 aaPredicted RBP19.22■□□□□ 0.67
GCFC2-202ENST00000409857 STAT2P52630 851 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 COG2Q14746 738 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 RASGRP2Q7LDG7 609 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 FANCBQ8NB91 859 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 CHURC1Q8WUH1 139 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
GCFC2-202ENST00000409857 GTPBP4Q9BZE4 634 aaKnown RBP19.22■□□□□ 0.67
GCFC2-202ENST00000409857 RBM28Q9NW13 759 aaKnown RBP19.22■□□□□ 0.67
GCFC2-202ENST00000409857 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 PCDHA7Q9UN72 937 aa19.22■□□□□ 0.67
GCFC2-202ENST00000409857 MYH15Q9Y2K3 1946 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
GCFC2-202ENST00000409857 SYCP1Q15431 976 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 KCTD1Q719H9 257 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 GTF3C2Q8WUA4 911 aaPredicted RBP19.21■□□□□ 0.67
GCFC2-202ENST00000409857 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
GCFC2-202ENST00000409857 LZTS2Q9BRK4 669 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 MYL10Q9BUA6 226 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 CFHR5Q9BXR6 569 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
GCFC2-202ENST00000409857 HOXC10Q9NYD6 342 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 HPS5Q9UPZ3 1129 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 MTMR7Q9Y216 660 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 SMARCA1P28370 1054 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 GNAQP50148 359 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 IRX3P78415 501 aaPredicted RBP19.21■□□□□ 0.67
GCFC2-202ENST00000409857 NYAP1Q6ZVC0 841 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 MICU3Q86XE3 530 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
GCFC2-202ENST00000409857 COL11A1P12107 1806 aaPredicted RBP19.21■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms