RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 KLC1Q07866 573 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 STX5Q13190 355 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 ITPRIPL1Q6GPH6 555 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 WAPLQ7Z5K2 1190 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TAGAPQ8N103 731 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 FAM160A2Q8N612 972 aaPredicted RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TSR2Q969E8 191 aaKnown RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 ERLEC1Q96DZ1 483 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 CRNKL1Q9BZJ0 848 aaKnown RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 FANCEQ9HB96 536 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 C9IYK1 514 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 DFFAO00273 331 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TBC1D12O60347 775 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TTC4O95801 387 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 STOMP27105 288 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 SFNP31947 248 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 GJA9P57773 515 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 FCHO2Q0JRZ9 810 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 C2orf76Q3KRA6 126 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TOM1L2Q6ZVM7 507 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 CABS1Q96KC9 395 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TINF2Q9BSI4 451 aa4.48□□□□□ -1.69
RGPD1-202ENST00000409776 PAPOLBQ9NRJ5 636 aaKnown RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 TTF2Q9UNY4 1162 aaKnown RBP4.48□□□□□ -1.69
RGPD1-202ENST00000409776 C5orf51A6NDU8 294 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 C2orf74A8MZ97 194 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 E7EVH7 732 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SLC26A4O43511 780 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 BTN2A2Q8WVV5 523 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 TRIM75PA6NK02 468 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SPTLC1O15269 473 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 GAS2O43903 313 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 GMFGO60234 142 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 RASGRP1O95267 797 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 FGFR1OPO95684 399 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KRT16P08779 473 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 GARTP22102 1010 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KRT9P35527 623 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 GUCY1A3Q02108 690 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 RNASELQ05823 741 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CDC16Q13042 620 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 STAT4Q14765 748 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 DAB2IPQ5VWQ8 1189 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 COPS6Q7L5N1 327 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KRT78Q8N1N4 520 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 DHTKD1Q96HY7 919 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ZNF396Q96N95 335 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 RANBP17Q9H2T7 1088 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 AKAP7Q9P0M2 348 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 MAFFQ9ULX9 164 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ABCG2Q9UNQ0 655 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ANKRD6Q9Y2G4 727 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 AP3B1O00203 1094 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 MAFKO60675 156 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CSF1RP07333 972 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 POTEIP0CG38 1075 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ATP2B1P20020 1258 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 HPDP32754 393 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ANO4Q32M45 955 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KLHL7Q8IXQ5 586 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 RASGEF1AQ8N9B8 481 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SPATA5Q8NB90 893 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 GIPC2Q8TF65 315 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 PPP1R13LQ8WUF5 828 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 DNAJC9Q8WXX5 260 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CCDC85AQ96PX6 553 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CCDC189A1A4V9 331 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 TRIM13O60858 407 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 DCTN3O75935 186 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 MYCP01106 439 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 TCP1P17987 556 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 NPR2P20594 1047 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ABATP80404 500 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SLC12A1Q13621 1099 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CBFBQ13951 182 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 AACSQ86V21 672 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 HEATR4Q86WZ0 1026 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 FAM71BQ8TC56 605 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 DDX54Q8TDD1 881 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 BLOC1S5Q8TDH9 187 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KATNAL1Q9BW62 490 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SLC6A15Q9H2J7 730 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CAB39LQ9H9S4 337 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 FDPSP14324 419 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SRP54P61011 504 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 TBL3Q12788 808 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 BNIP1Q12981 228 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 E2F5Q15329 346 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 INTS6LQ5JSJ4 861 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ODR4Q5SWX8 454 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 NLRP13Q86W25 1043 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 SLC17A8Q8NDX2 589 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 BEST2Q8NFU1 509 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 FAM81AQ8TBF8 368 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms