RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 IMPACTQ9P2X3 320 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 BACE2Q9Y5Z0 518 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQ45 241 aaPredicted RBP6.52□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQY0 241 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 AURKAO14965 403 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 PRKCAP17252 672 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 ZNF513Q8N8E2 541 aaPredicted RBP6.52□□□□□ -1.37
PMS1-203ENST00000409593 TMEM52Q8NDY8 209 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 C8orf37Q96NL8 207 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 KCNK12Q9HB15 430 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 ATP2B1P20020 1258 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 SDHBP21912 280 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 CEBPAP49715 358 aaPredicted RBP6.51□□□□□ -1.37
PMS1-203ENST00000409593 LAPTM5Q13571 262 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 EEF1DP3Q658K8 133 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 RCSD1Q6JBY9 416 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 IRF2BP1Q8IU81 584 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 TRIM55Q9BYV6 548 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
PMS1-203ENST00000409593 C2orf71A6NGG8 1288 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 ARL4AP40617 200 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 DDR2Q16832 855 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 EEPD1Q7L9B9 569 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 CKAP2LQ8IYA6 745 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
PMS1-203ENST00000409593 CRTAC1Q9NQ79 661 aa6.5□□□□□ -1.37
PMS1-203ENST00000409593 OR14I1A6ND48 311 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 CYP4F8P98187 520 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 MESP2Q0VG99 397 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 SCRN1Q12765 414 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 PKN1Q16512 942 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 SYDE1Q6ZW31 735 aaPredicted RBP6.49□□□□□ -1.37
PMS1-203ENST00000409593 TRIM59Q8IWR1 403 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 KLF4O43474 513 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 C8AP07357 584 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 PNLIPP16233 465 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 GTF2F1P35269 517 aaKnown RBP eCLIP6.49□□□□□ -1.37
PMS1-203ENST00000409593 ZNF124Q15973 351 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 GTF2IRD2BQ6EKJ0 949 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 GTF2IRD2Q86UP8 949 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 ZNF227Q86WZ6 799 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 BTN2A2Q8WVV5 523 aa6.49□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
PMS1-203ENST00000409593 U2SURPO15042 1029 aaKnown RBP6.48□□□□□ -1.37
PMS1-203ENST00000409593 TBX1O43435 398 aa6.48□□□□□ -1.37
PMS1-203ENST00000409593 ITGAVP06756 1048 aa6.48□□□□□ -1.37
PMS1-203ENST00000409593 L1CAMP32004 1257 aa6.48□□□□□ -1.37
PMS1-203ENST00000409593 CPNE8Q86YQ8 564 aa6.48□□□□□ -1.37
PMS1-203ENST00000409593 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 AGRPO00253 132 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 MSL3P1P0C860 447 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 PAMP19021 973 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 TACR1P25103 407 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 RAB33AQ14088 237 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 MRGPRX3Q96LB0 322 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 GPRC5CQ9NQ84 441 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 CLEC1BQ9P126 229 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 ACSL6Q9UKU0 697 aa6.47□□□□□ -1.37
PMS1-203ENST00000409593 NUDT19A8MXV4 375 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 MVKQ03426 396 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 TMEM132EQ6IEE7 984 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 SLC26A8Q96RN1 970 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 PPP1R16BQ96T49 567 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 NKX2-4Q9H2Z4 354 aa6.46□□□□□ -1.37
PMS1-203ENST00000409593 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 MPOP05164 745 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 THBDP07204 575 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 SNRPB2P08579 225 aaKnown RBP6.45□□□□□ -1.38
PMS1-203ENST00000409593 PLS3P13797 630 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 RAB3GAP1Q15042 981 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 NPM2Q86SE8 214 aaKnown RBP6.45□□□□□ -1.38
PMS1-203ENST00000409593 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 EPN3Q9H201 632 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 ZNF552Q9H707 407 aaPredicted RBP6.45□□□□□ -1.38
PMS1-203ENST00000409593 TRBV23OR9-2A0A075B6M9 112 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 NFIBO00712 420 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 ECI1P42126 302 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 KCNJ6P48051 423 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 ERVFRD-1P60508 538 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 BICRALQ6AI39 1079 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 COPS5Q92905 334 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 TNFRSF12AQ9NP84 129 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 PDLIM7Q9NR12 457 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 CYP26B1Q9NR63 512 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
PMS1-203ENST00000409593 MYOCOSA0A1B0GUC4 107 aa6.44□□□□□ -1.38
PMS1-203ENST00000409593 TMEM253P0C7T8 217 aa6.44□□□□□ -1.38
PMS1-203ENST00000409593 SRSF3P84103 164 aaKnown RBP6.44□□□□□ -1.38
PMS1-203ENST00000409593 KCNN1Q92952 543 aa6.44□□□□□ -1.38
PMS1-203ENST00000409593 GULP1Q9UBP9 304 aa6.44□□□□□ -1.38
PMS1-203ENST00000409593 RAP1GAPP47736 663 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 CORO7P57737 925 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 FZD5Q13467 585 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms