RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 GOLGA6CA6NDK9 693 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 GOLGA6BA6NDN3 693 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 GOLGA6DP0CG33 693 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 HADHQ16836 314 aaKnown RBP27.56■■■□□ 2
SPIRE1-202ENST00000409402 KLHL7Q8IXQ5 586 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 GOLGA6AQ9NYA3 693 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 AMFRQ9UKV5 643 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 TLR3O15455 904 aaKnown RBP27.56■■■□□ 2
SPIRE1-202ENST00000409402 FYB2Q5VWT5 728 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 AOC3Q16853 763 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 ZFP91Q96JP5 570 aaPredicted RBP27.56■■■□□ 2
SPIRE1-202ENST00000409402 RAB20Q9NX57 234 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 PIM2Q9P1W9 311 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 AKT3Q9Y243 479 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
SPIRE1-202ENST00000409402 CDHR1Q96JP9 859 aa27.56■■■□□ 2
SPIRE1-202ENST00000409402 POMGNT1Q8WZA1 660 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 FEZ2Q9UHY8 353 aaPredicted RBP27.55■■■□□ 2
SPIRE1-202ENST00000409402 ABT1Q9ULW3 272 aaKnown RBP27.55■■■□□ 2
SPIRE1-202ENST00000409402 KIF1BO60333 1816 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 OATP04181 439 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 ADAM9Q13443 819 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 SUSD4Q5VX71 490 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 SCYL2Q6P3W7 929 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 VPS52Q8N1B4 723 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 CCDC110Q8TBZ0 833 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 SLC7A3Q8WY07 619 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 ERO1AQ96HE7 468 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 KIAA1024Q9UPX6 916 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 RPN1P04843 607 aaKnown RBP27.55■■■□□ 2
SPIRE1-202ENST00000409402 UBXN2AP68543 259 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 EXOC8Q8IYI6 725 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 LSG1Q9H089 658 aaKnown RBP27.55■■■□□ 2
SPIRE1-202ENST00000409402 SHROOM2Q13796 1616 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 TRAPPC10P48553 1259 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 ODR4Q5SWX8 454 aa27.55■■■□□ 2
SPIRE1-202ENST00000409402 EBAG9O00559 213 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 FMNL1O95466 1100 aaPredicted RBP27.54■■■□□ 2
SPIRE1-202ENST00000409402 ERCC6LQ2NKX8 1250 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 SYMPKQ92797 1274 aaKnown RBP27.54■■■□□ 2
SPIRE1-202ENST00000409402 SYDE2Q5VT97 1194 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 KRBA2Q6ZNG9 492 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 INTS8Q75QN2 995 aaKnown RBP27.54■■■□□ 2
SPIRE1-202ENST00000409402 WDR11Q9BZH6 1224 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 SLC39A2Q9NP94 309 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 HSPA1LP34931 641 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 LCORLQ8N3X6 602 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 CCDC127Q96BQ5 260 aa27.54■■■□□ 2
SPIRE1-202ENST00000409402 TPD52P55327 224 aaPredicted RBP27.54■■■□□ 2
SPIRE1-202ENST00000409402 SCRN1Q12765 414 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 PDZD4Q76G19 769 aaPredicted RBP27.53■■■□□ 2
SPIRE1-202ENST00000409402 AFF2P51816 1311 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 MAP3K4Q9Y6R4 1608 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 APOL6Q9BWW8 343 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 PRKAG2Q9UGJ0 569 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 VIMP08670 466 aaKnown RBP27.53■■■□□ 2
SPIRE1-202ENST00000409402 GCFC2P16383 781 aaKnown RBP27.53■■■□□ 2
SPIRE1-202ENST00000409402 IFRD2Q12894 506 aaPredicted RBP27.53■■■□□ 2
SPIRE1-202ENST00000409402 RSAD2Q8WXG1 361 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 NUB1Q9Y5A7 615 aa27.53■■■□□ 2
SPIRE1-202ENST00000409402 SLC16A2P36021 539 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 PIK3CAP42336 1068 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 LACTBP83111 547 aaPredicted RBP27.52■■■□□ 2
SPIRE1-202ENST00000409402 FOXP1Q9H334 677 aaPredicted RBP27.52■■■□□ 2
SPIRE1-202ENST00000409402 ZNF277Q9NRM2 450 aaPredicted RBP27.52■■■□□ 2
SPIRE1-202ENST00000409402 ABCB4P21439 1286 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 APOA5Q6Q788 366 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 CUEDC2Q9H467 287 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 POLR2BP30876 1174 aaKnown RBP27.52■■■□□ 2
SPIRE1-202ENST00000409402 SLC12A2P55011 1212 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 OR8K1Q8NGG5 319 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 CDC42BPGQ6DT37 1551 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 HNRNPDLO14979 420 aaKnown RBP27.52■■■□□ 2
SPIRE1-202ENST00000409402 LONRF2Q1L5Z9 754 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 PPM1KQ8N3J5 372 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 SLC10A4Q96EP9 437 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 PSMB7Q99436 277 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 ANTXR1Q9H6X2 564 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 LMBRD1Q9NUN5 540 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 LRFN2Q9ULH4 789 aa27.52■■■□□ 2
SPIRE1-202ENST00000409402 HPDP32754 393 aaPredicted RBP27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 FAM160B2Q86V87 743 aa27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 MTMR6Q9Y217 621 aa27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 CDK12Q9NYV4 1490 aaPredicted RBP27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 ZNF445P59923 1031 aa27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 MIGA2Q7L4E1 593 aa27.51■■□□□ 1.99
SPIRE1-202ENST00000409402 SARNPP82979 210 aaKnown RBP27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 ZBTB9Q96C00 473 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 PIGSQ96S52 555 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 FOXP4Q8IVH2 680 aaPredicted RBP27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 XPO4Q9C0E2 1151 aaKnown RBP27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 C21orf2O43822 256 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 FBXO18Q8NFZ0 1043 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 CLIC6Q96NY7 704 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 PRKAB2O43741 272 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 MECOMQ03112 1051 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 RGS12O14924 1447 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 GAP43P17677 238 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms