RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TFIP11Q9UBB9 837 aaKnown RBP19.3■□□□□ 0.68
SSB-202ENST00000409333 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
SSB-202ENST00000409333 FDX1P10109 184 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 CETPP11597 493 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 IRX3P78415 501 aaPredicted RBP19.29■□□□□ 0.68
SSB-202ENST00000409333 UBE2SQ16763 222 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 POTEEQ6S8J3 1075 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 PIK3AP1Q6ZUJ8 805 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 REXO1Q8N1G1 1221 aaKnown RBP19.29■□□□□ 0.68
SSB-202ENST00000409333 BRI3BPQ8WY22 251 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 PSTPIP2Q9H939 334 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 BIN2Q9UBW5 565 aaPredicted RBP19.29■□□□□ 0.68
SSB-202ENST00000409333 LCTP09848 1927 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 TMEM88BA6NKF7 163 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 KRT85P78386 507 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 FSTL1Q12841 308 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 USP28Q96RU2 1077 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
SSB-202ENST00000409333 TMEM260Q9NX78 707 aa19.29■□□□□ 0.68
SSB-202ENST00000409333 ABT1Q9ULW3 272 aaKnown RBP19.29■□□□□ 0.68
SSB-202ENST00000409333 ABCB11O95342 1321 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 FIBPO43427 364 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 MCM4P33991 863 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 TOB1P50616 345 aaPredicted RBP19.28■□□□□ 0.68
SSB-202ENST00000409333 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
SSB-202ENST00000409333 TRAF1Q13077 416 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 TMEM132BQ14DG7 1078 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 JAKMIP3Q5VZ66 844 aa19.28■□□□□ 0.68
SSB-202ENST00000409333 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
SSB-202ENST00000409333 BTBD19C9JJ37 291 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 PEX10O60683 326 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 ALAS1P13196 640 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 CLK2P49760 499 aaKnown RBP19.27■□□□□ 0.68
SSB-202ENST00000409333 MRPL12P52815 198 aaKnown RBP19.27■□□□□ 0.68
SSB-202ENST00000409333 PABPC4Q13310 644 aaKnown RBP eCLIP19.27■□□□□ 0.681e-18■■■■□ 20.4
SSB-202ENST00000409333 NBR1Q14596 966 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 PGBD1Q96JS3 809 aa19.27■□□□□ 0.68
SSB-202ENST00000409333 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
SSB-202ENST00000409333 MEIS2O14770 477 aa19.27■□□□□ 0.67
SSB-202ENST00000409333 SLC10A3P09131 477 aa19.27■□□□□ 0.67
SSB-202ENST00000409333 HERVK_113P62684 666 aa19.27■□□□□ 0.67
SSB-202ENST00000409333 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.67
SSB-202ENST00000409333 HOMER2Q9NSB8 354 aa19.27■□□□□ 0.67
SSB-202ENST00000409333 MRPL11Q9Y3B7 192 aaKnown RBP19.27■□□□□ 0.67
SSB-202ENST00000409333 RIPK3Q9Y572 518 aa19.27■□□□□ 0.67
SSB-202ENST00000409333 CCDC194A0A1B0GVG4 234 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 OSBPP22059 807 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 OAZ1P54368 228 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 SNRNP48Q6IEG0 339 aaKnown RBP19.26■□□□□ 0.67
SSB-202ENST00000409333 LBX2Q6XYB7 198 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 TBC1D5Q92609 795 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 BTBD7Q9P203 1132 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 CLIC4Q9Y696 253 aa19.26■□□□□ 0.67
SSB-202ENST00000409333 PDHXO00330 501 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 NFIBO00712 420 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 WNT7AO00755 349 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 ATP2A1O14983 1001 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 CYP2C8P10632 490 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 ATP2B1P20020 1258 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 RILPL1Q5EBL4 403 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 MUM1L1Q5H9M0 696 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 KRT25Q7Z3Z0 450 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 CLEC4DQ8WXI8 215 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 PTPN18Q99952 460 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
SSB-202ENST00000409333 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
SSB-202ENST00000409333 CFBP00751 764 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 HOXA13P31271 388 aaPredicted RBP19.24■□□□□ 0.67
SSB-202ENST00000409333 PLS1Q14651 629 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 INF2Q27J81 1249 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 ATL3Q6DD88 541 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 ANKRD23Q86SG2 305 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 PAGR1Q9BTK6 254 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 CFAP45Q9UL16 551 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 CNMDO75829 334 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 NONOQ15233 471 aaKnown RBP eCLIP19.24■□□□□ 0.67
SSB-202ENST00000409333 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 MB21D1Q8N884 522 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
SSB-202ENST00000409333 TRERF1Q96PN7 1200 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 TEX13BQ9BXU2 312 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 POLR3EQ9NVU0 708 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 PNMA3Q9UL41 463 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 NOL7Q9UMY1 257 aaKnown RBP19.24■□□□□ 0.67
SSB-202ENST00000409333 SLC45A1Q9Y2W3 748 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 PCDHB6Q9Y5E3 794 aa19.24■□□□□ 0.67
SSB-202ENST00000409333 PLXNB2O15031 1838 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
SSB-202ENST00000409333 PIK3CDO00329 1044 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 STAT3P40763 770 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
SSB-202ENST00000409333 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 SCAND2PQ9GZW5 306 aaPredicted RBP19.23■□□□□ 0.67
SSB-202ENST00000409333 TXNRD2Q9NNW7 524 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 RNF146Q9NTX7 359 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms