RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CEP170P1Q96L14 293 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 MIS12Q9H081 205 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RRAGCQ9HB90 399 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PIH1D3Q9NQM4 214 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 GGA3Q9NZ52 723 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 DBNLQ9UJU6 430 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 LUC7L2Q9Y383 392 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 COL4A3BPQ9Y5P4 624 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CPDO75976 1380 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 KRT86O43790 486 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 CRCPO75575 148 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 EIF2AK2P19525 551 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 LRMPQ12912 555 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 FAM178BQ8IXR5 827 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PI4K2BQ8TCG2 481 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TCP11Q8WWU5 503 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 KMT5AQ9NQR1 393 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 C1orf112Q9NSG2 853 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 USTQ9Y2C2 406 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 CNTNAP4Q9C0A0 1308 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 USP31Q70CQ4 1352 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PNMA6FA0A0J9YX94 578 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 GOLGA6CA6NDK9 693 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 GOLGA6BA6NDN3 693 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PSMD14O00487 310 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 DPYSL4O14531 572 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 GOLGA6DP0CG33 693 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 POSTNQ15063 836 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 MTERF2Q49AM1 385 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 STRIP1Q5VSL9 837 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TBC1D16Q8TBP0 767 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 FAM167AQ96KS9 214 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 GOLGA6AQ9NYA3 693 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TLR7Q9NYK1 1049 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 RPAP1Q9BWH6 1393 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 CROCC2H7BZ55 1655 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 ZC3H13Q5T200 1668 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 XPAP23025 273 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SPP2Q13103 211 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SNW1Q13573 536 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TTC30AQ86WT1 665 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TRIM50Q86XT4 487 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SUGT1Q9Y2Z0 365 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 ABCB11O95342 1321 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 LMTK2Q8IWU2 1503 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 DIP2AQ14689 1571 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 C1orf228Q6PIY5 440 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PPP1R21Q6ZMI0 780 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TRPM1Q7Z4N2 1603 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 CCT6BQ92526 530 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 BLZF1Q9H2G9 400 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 LARSQ9P2J5 1176 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 CGNQ9P2M7 1197 aaKnown RBP5.54□□□□□ -1.52
SCN3A-203ENST00000409101 MAPK8IP1Q9UQF2 711 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 KIF28PB7ZC32 967 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 YY1P25490 414 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 JAK3P52333 1124 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 TRIM14Q14142 442 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PDXDC2PQ6P474 469 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SMIM5Q71RC9 77 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 NELFBQ8WX92 580 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 PIDD1Q9HB75 910 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 POLIQ9UNA4 740 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 LAMC1P11047 1609 aa5.54□□□□□ -1.52
SCN3A-203ENST00000409101 SOS2Q07890 1332 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CCL15-CCL14A0A0B4J2E2 113 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 RIOK3O14730 519 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 DLATP10515 647 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 SYT1P21579 422 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NT5C2P49902 561 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 GTF2A2P52657 109 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 GNG11P61952 73 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ITKQ08881 620 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 KRT81Q14533 505 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CCL15Q16663 113 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 TMCO3Q6UWJ1 677 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 MYOCDQ8IZQ8 938 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 UBL4BQ8N7F7 174 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 RPAP3Q9H6T3 665 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ACAD9Q9H845 621 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 SLC8A2Q9UPR5 921 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 TTLL3Q9Y4R7 772 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ABCA6Q8N139 1617 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 HNRNPDLO14979 420 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 GCFC2P16383 781 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CYP4A11Q02928 519 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 DSTYKQ6XUX3 929 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ACCSQ96QU6 501 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 SLC12A6Q9UHW9 1150 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 UBN2Q6ZU65 1347 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms