RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 SURF1Q15526 300 aa4.13□□□□□ -1.75
MIR548I3-201ENST00000408378 NAT16Q8N8M0 369 aa4.13□□□□□ -1.75
MIR548I3-201ENST00000408378 TXNDC5Q8NBS9 432 aaKnown RBP4.13□□□□□ -1.75
MIR548I3-201ENST00000408378 SYT3Q9BQG1 590 aa4.13□□□□□ -1.75
MIR548I3-201ENST00000408378 ZNF623O75123 536 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 MIIPQ5JXC2 388 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 FAM26FQ5R3K3 315 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 SV2BQ7L1I2 683 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 USP48Q86UV5 1035 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 SLFN12Q8IYM2 578 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 PTPN18Q99952 460 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 SRCIN1Q9C0H9 1055 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 MIR1-1HGQ9H1L0 117 aa4.12□□□□□ -1.75
MIR548I3-201ENST00000408378 NARSO43776 548 aaKnown RBP4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 ERBB2P04626 1255 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 USP17L7P0C7H9 530 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 RPL13P26373 211 aaKnown RBP4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 DGCR2P98153 550 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 RPL6Q02878 288 aaKnown RBP4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 TSNAXIP1Q2TAA8 658 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 STK32CQ86UX6 486 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 LCORQ96JN0 433 aaPredicted RBP4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 SEMA4AQ9H3S1 761 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 TESMINQ9Y4I5 508 aa4.11□□□□□ -1.75
MIR548I3-201ENST00000408378 DDX3XO00571 662 aaKnown RBP eCLIP4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 THBS2P35442 1172 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 RNF4P78317 190 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 CACNB2Q08289 660 aaPredicted RBP4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 NBPF9Q3BBW0 867 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 LSM12Q3MHD2 195 aaKnown RBP4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 RNF207Q6ZRF8 634 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 PLEKHH3Q7Z736 793 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 AMER2Q8N7J2 671 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 ANKRD24Q8TF21 1146 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 ZNF503Q96F45 646 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 GORASP1Q9BQQ3 440 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 PDLIM7Q9NR12 457 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 CHST7Q9NS84 486 aa4.1□□□□□ -1.75
MIR548I3-201ENST00000408378 PATE3B3GLJ2 98 aa4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 SIGLEC6O43699 453 aa4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 ENDOUP21128 410 aaKnown RBP4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 Q8TCH9 128 aa4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 SETDB2Q96T68 719 aa4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 REV1Q9UBZ9 1251 aa4.09□□□□□ -1.75
MIR548I3-201ENST00000408378 ZNF205O95201 554 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 CYP2C8P10632 490 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 RPS26P62854 115 aaKnown RBP4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 PTH1RQ03431 593 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 CCDC85BQ15834 202 aaPredicted RBP4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 ENOX2Q16206 610 aaKnown RBP4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 USP39Q53GS9 565 aaKnown RBP4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 TMEM201Q5SNT2 666 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 HLA-DQA1Q5Y7H0 255 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 CRTC3Q6UUV7 619 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 ARHGEF18Q6ZSZ5 1173 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 TMC7Q7Z402 723 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 AEBP1Q8IUX7 1158 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 LINC00482Q8N8I6 264 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 ZNF512BQ96KM6 892 aaPredicted RBP4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 RBCK1Q9BYM8 510 aa4.08□□□□□ -1.76
MIR548I3-201ENST00000408378 GSTM1P09488 218 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 VAV1P15498 845 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 CTSKP43235 329 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 KRTAP10-11P60412 298 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 PRKD1Q15139 912 aaPredicted RBP4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 AGAP2Q99490 1192 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 C11orf84Q9BUA3 381 aaPredicted RBP4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 GFOD1Q9NXC2 390 aa4.07□□□□□ -1.76
MIR548I3-201ENST00000408378 DNAJA2O60884 412 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 CYP1A1P04798 512 aaPredicted RBP4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 C8BP07358 591 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 BMP8BP34820 402 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 LIG3P49916 1009 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 PPP2CBP62714 309 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 PPP2CAP67775 309 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 CCDC142Q17RM4 750 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 AGMOQ6ZNB7 445 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 LDLRAD3Q86YD5 345 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 CCDC97Q96F63 343 aaPredicted RBP4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 ADOQ96SZ5 270 aa4.06□□□□□ -1.76
MIR548I3-201ENST00000408378 UBOX5O94941 541 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 TFE3P19532 575 aaPredicted RBP4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 MRPS21P82921 87 aaKnown RBP4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 HS1BP3Q53T59 392 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 RTP2Q5QGT7 225 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 NBPF12Q5TAG4 269 aaPredicted RBP4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 CPA5Q8WXQ8 436 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 EXTL1Q92935 676 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 TSPAN17Q96FV3 270 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 C12orf49Q9H741 205 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 FAM8A1Q9UBU6 413 aa4.05□□□□□ -1.76
MIR548I3-201ENST00000408378 BPNT1O95861 308 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 MAPK8P45983 427 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 EPHB4P54760 987 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 PRAMEF18Q5VWM3 479 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 KYQ8NBH2 561 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 DMRT1Q9Y5R6 373 aa4.04□□□□□ -1.76
MIR548I3-201ENST00000408378 B4GALT4O60513 344 aa4.03□□□□□ -1.76
MIR548I3-201ENST00000408378 GLI4P10075 376 aa4.03□□□□□ -1.76
MIR548I3-201ENST00000408378 ITGB6P18564 788 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms