RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ASMTLO95671 621 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 TKFCQ3LXA3 575 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 HOMER1Q86YM7 354 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 FAM177A1Q8N128 213 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 KREMEN2Q8NCW0 462 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 KCTD13Q8WZ19 329 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 APPBP2Q92624 585 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 ADAMTS10Q9H324 1103 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 SLAMF8Q9P0V8 285 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 CLEC1BQ9P126 229 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 ZNF281Q9Y2X9 895 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 EIF4G1Q04637 1599 aaKnown RBP7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 ARNTLO00327 626 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 SCG5P05408 212 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 SEPHS1P49903 392 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 CBX2Q14781 532 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 NTRK3Q16288 839 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 RCSD1Q6JBY9 416 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 SCUBE1Q8IWY4 988 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 TMEM52Q8NDY8 209 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 NPLOC4Q8TAT6 608 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 FRS2Q8WU20 508 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 ERVK13-1Q9NX77 482 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 LMCD1Q9NZU5 365 aa7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 ANGEL1Q9UNK9 670 aaKnown RBP7.26□□□□□ -1.25
HMGB3P19-201ENST00000403971 MROH2BQ7Z745 1585 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 PEG3Q9GZU2 1588 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 PLS3P13797 630 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 CEBPAP49715 358 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 MAP4K2Q12851 820 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 EGFLAMQ63HQ2 1017 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 USP53Q70EK8 1073 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 CCDC103Q8IW40 242 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 NAT16Q8N8M0 369 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 PTCHD1Q96NR3 888 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 IPO9Q96P70 1041 aaKnown RBP7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 ALPK1Q96QP1 1244 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 ADAMTS6Q9UKP5 1117 aa7.25□□□□□ -1.25
HMGB3P19-201ENST00000403971 HYAL3O43820 417 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 CPP00450 1065 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 C6orf222P0C671 652 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 FUT4P22083 530 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 ZC3H12BQ5HYM0 836 aaKnown RBP7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 EEF1DP3Q658K8 133 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 CPNE8Q86YQ8 564 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 KSR1Q8IVT5 923 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 PPIL6Q8IXY8 311 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 G6PC3Q9BUM1 346 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 CD2APQ9Y5K6 639 aa7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 RSF1Q96T23 1441 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P19-201ENST00000403971 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 WNT11O96014 354 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 ZGLP1P0C6A0 271 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 HSD3B2P26439 372 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 LAPTM5Q13571 262 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 MBLAC2Q68D91 279 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 TP53INP2Q8IXH6 220 aa7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 FCRL2Q96LA5 508 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 NCOA5Q9HCD5 579 aaKnown RBP7.23□□□□□ -1.25
HMGB3P19-201ENST00000403971 ASXL2Q76L83 1435 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 NPHP3-ACAD11A0A0J9YXS1 232 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 USP2O75604 605 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 LCP1P13796 627 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 HK2P52789 917 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 LRP8Q14114 963 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 PLCL1Q15111 1095 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 INF2Q27J81 1249 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 PLEKHG4Q58EX7 1191 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 PI4K2BQ8TCG2 481 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 LINC01599Q8WXQ3 324 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 MAP6Q96JE9 813 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 HHIPL1Q96JK4 782 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 CLUHP3Q96NS8 147 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 TMEM59LQ9UK28 342 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 TRAF6Q9Y4K3 522 aa7.22□□□□□ -1.25
HMGB3P19-201ENST00000403971 SMARCA2P51531 1590 aa7.21□□□□□ -1.25
HMGB3P19-201ENST00000403971 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 PAMP19021 973 aa7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 TCEA2Q15560 299 aa7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 KIAA0907Q7Z7F0 614 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 MBNL3Q9NUK0 354 aaKnown RBP7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 WIZO95785 1651 aa7.21□□□□□ -1.26
HMGB3P19-201ENST00000403971 CCDC163A0A0D9SF12 145 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 FADS2P1A8MWK0 482 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 RNASE1P07998 156 aaKnown RBP7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 ENDOUP21128 410 aaKnown RBP7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 ERVFC1P60507 584 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 ACBD5Q5T8D3 534 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms