RNA–Protein interactions for RNA: ENST00000399597.5

CACNA1C-207, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-207ENST00000399597 CFLARO15519 480 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 SKIP12755 728 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 PCYT1AP49585 367 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 CCDC157Q569K6 752 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 SPZ1Q9BXG8 430 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 C14orf93Q9H972 538 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 HADHAP40939 763 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 TFCP2Q12800 502 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 KIAA2013Q8IYS2 634 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-207ENST00000399597 DYTNA2CJ06 578 aa12.15□□□□□ -0.47
CACNA1C-207ENST00000399597 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.47
CACNA1C-207ENST00000399597 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.47
CACNA1C-207ENST00000399597 NCLNQ969V3 563 aa12.15□□□□□ -0.47
CACNA1C-207ENST00000399597 IFNKQ9P0W0 207 aa12.15□□□□□ -0.47
CACNA1C-207ENST00000399597 TRAF5O00463 557 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 GRK2P25098 689 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 MRPL28Q13084 256 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 BBOF1Q8ND07 529 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 HOXC9P31274 260 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TJAP1Q5JTD0 557 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 SCINQ9Y6U3 715 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 SERPINB2P05120 415 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 AKIRIN2Q53H80 203 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 NANOGNBQ7Z5D8 188 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 FAN1Q9Y2M0 1017 aa12.14□□□□□ -0.47
CACNA1C-207ENST00000399597 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 IFNB1P01574 187 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 EVCP57679 992 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 FLT4P35916 1363 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 EVI5O60447 810 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 A1BGP04217 495 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 ZNF174Q15697 407 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PHLDB3Q6NSJ2 640 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PLEKHM3Q6ZWE6 761 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 SV2BQ7L1I2 683 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 SSH1Q8WYL5 1049 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 BRF1Q92994 677 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 MRPL11Q9Y3B7 192 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 ADCY7P51828 1080 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PPP1R14AQ96A00 147 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 TNNC2P02585 160 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 RAD18Q9NS91 495 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
CACNA1C-207ENST00000399597 PRR23D1E9PI22 279 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 PRR23D2P0DMB1 279 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 ZNF18P17022 549 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 TNNI1P19237 187 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
CACNA1C-207ENST00000399597 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms