RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PRPF40BQ6NWY9 871 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 GPT2Q8TD30 523 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 PAIP2Q9BPZ3 127 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 HINFPQ9BQA5 517 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SAP130Q9H0E3 1048 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 KLHL11Q9NVR0 708 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SNCAIPQ9Y6H5 919 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 LMO7Q8WWI1 1683 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 A0A1B0GVC2 190 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 KCNJ4P48050 445 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 HSD17B7P56937 341 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 KIAA2012Q0VF49 1180 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 ADCK5Q3MIX3 580 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 ATP13A4Q4VNC1 1196 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 PERM1Q5SV97 790 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 BEND3Q5T5X7 828 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 MICALL2Q8IY33 904 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM26EQ8N5C1 309 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 THAP11Q96EK4 314 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM210AQ96ND0 272 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 MYD88Q99836 296 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 FNIP2Q9P278 1114 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SEL1LQ9UBV2 794 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 DMTF1Q9Y222 760 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 USP16Q9Y5T5 823 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 RGPD1P0DJD0 1748 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 KDRP35968 1356 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 FSD2A1L4K1 749 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 RNMTO43148 476 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 PLOD3O60568 738 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 ATF7P17544 494 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 UBASH3AP57075 661 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 INHBEP58166 350 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 CCBE1Q6UXH8 406 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 OTUD6AQ7L8S5 288 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 XAGE3Q8WTP9 111 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 N4BP2L2Q92802 583 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 SHDQ96IW2 340 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 POLR3CQ9BUI4 534 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 LRRC2Q9BYS8 371 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 BICC1Q9H694 974 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 YY1AP1Q9H869 796 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 CCT2P78371 535 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 ITKQ08881 620 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 PRKG2Q13237 762 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 COPS6Q7L5N1 327 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 POF1BQ8WVV4 589 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 RRP15Q9Y3B9 282 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 JCADQ9P266 1359 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 IBTKQ9P2D0 1353 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 OPLAHO14841 1288 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 GFPT2O94808 682 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 CBX2Q14781 532 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 GRM3Q14832 879 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 PLEKHO1Q53GL0 409 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 CXorf57Q6NSI4 855 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 NECAB2Q7Z6G3 386 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 ZBTB46Q86UZ6 589 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 PPM1MQ96MI6 270 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 OSGEPQ9NPF4 335 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 ZNF112Q9UJU3 913 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 LUC7L2Q9Y383 392 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 AFG3L2Q9Y4W6 797 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 ADCY9O60503 1353 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 CAMTA1Q9Y6Y1 1673 aa7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 COL14A1Q05707 1796 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-202ENST00000399438 GABRDO14764 452 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRIM37O94972 964 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CASTP20810 708 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 HSPA1LP34931 641 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 UBXN2AP68543 259 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 GTF2IP78347 998 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 TSEN2Q8NCE0 465 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 RIN3Q8TB24 985 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 OSBPL7Q9BZF2 842 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 DBNDD1Q9H9R9 158 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 NCOA5Q9HCD5 579 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 NLRC4Q9NPP4 1024 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 ANKEF1Q9NU02 776 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CEP72Q9P209 647 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CLEC11AQ9Y240 323 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 PCDHGA10Q9Y5H3 936 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CPLX1O14810 134 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 PMM2O15305 246 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 GRM1Q13255 1194 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 GBX1Q14549 363 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 ZSCAN23Q3MJ62 389 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 NAXEQ8NCW5 288 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 RAPGEF4Q8WZA2 1011 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms