RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 POLR3GO15318 223 aaPredicted RBP14.88□□□□□ -0.03
TOP3B-202ENST00000398793 EVCP57679 992 aa14.88□□□□□ -0.03
TOP3B-202ENST00000398793 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
TOP3B-202ENST00000398793 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
TOP3B-202ENST00000398793 KANSL2Q9H9L4 492 aa14.88□□□□□ -0.03
TOP3B-202ENST00000398793 JMJD4Q9H9V9 463 aa14.88□□□□□ -0.03
TOP3B-202ENST00000398793 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
TOP3B-202ENST00000398793 FAM53CQ9NYF3 392 aa14.88□□□□□ -0.03
TOP3B-202ENST00000398793 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
TOP3B-202ENST00000398793 PPP1R11O60927 126 aaPredicted RBP14.87□□□□□ -0.03
TOP3B-202ENST00000398793 FLOT1O75955 427 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 CASQ1P31415 396 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 TXKP42681 527 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 QRICH1Q2TAL8 776 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 KLHL10Q6JEL2 608 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 BANK1Q8NDB2 785 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 ZNF446Q9NWS9 450 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 RTEL1Q9NZ71 1219 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 CNTNAP1P78357 1384 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 DDX39AO00148 427 aaKnown RBP14.87□□□□□ -0.03
TOP3B-202ENST00000398793 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
TOP3B-202ENST00000398793 DDAH1O94760 285 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 CCDC186Q7Z3E2 898 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 LUZP1Q86V48 1076 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 SH2D3AQ9BRG2 576 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 RNF26Q9BY78 433 aaPredicted RBP14.87□□□□□ -0.03
TOP3B-202ENST00000398793 BLZF1Q9H2G9 400 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 GPRC5DQ9NZD1 345 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
TOP3B-202ENST00000398793 CALM1P0DP23 149 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CALM2P0DP24 149 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CALM3P0DP25 149 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 GRM4Q14833 912 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CDC37Q16543 378 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 BLIDQ8IZY5 108 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 AGBL3Q8NEM8 1001 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 WASF1Q92558 559 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 NCAPGQ9BPX3 1015 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 IDI2Q9BXS1 227 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 BCCIPQ9P287 314 aaKnown RBP eCLIP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 SUGT1Q9Y2Z0 365 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 ALAS1P13196 640 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 PNOCQ13519 176 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 BMS1Q14692 1282 aaKnown RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 DPY19L2Q6NUT2 758 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 PAGR1Q9BTK6 254 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CSRNP2Q9H175 543 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 RAVER2Q9HCJ3 691 aaKnown RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 LCMT1Q9UIC8 334 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
TOP3B-202ENST00000398793 CHMP2AO43633 222 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 TDP2O95551 362 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 NSMFQ6X4W1 530 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 TMEM60Q9H2L4 133 aa14.86□□□□□ -0.03
TOP3B-202ENST00000398793 ZNF543Q08ER8 600 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 PFKFB3Q16875 520 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-202ENST00000398793 TTC38Q5R3I4 469 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-202ENST00000398793 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 BMP3P12645 472 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 PFKFB1P16118 471 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 TMEM179Q6ZVK1 233 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 CYP2W1Q8TAV3 490 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
TOP3B-202ENST00000398793 DRC1Q96MC2 740 aa14.85□□□□□ -0.03
TOP3B-202ENST00000398793 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-202ENST00000398793 FZD9O00144 591 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 FGRP09769 529 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 TECP42680 631 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 GPIHBP1Q8IV16 184 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 TXLNBQ8N3L3 684 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 RRAGCQ9HB90 399 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 SWAP70Q9UH65 585 aa14.84□□□□□ -0.03
TOP3B-202ENST00000398793 CAP2P40123 477 aa14.83□□□□□ -0.03
TOP3B-202ENST00000398793 CHMP4BP1P59074 171 aa14.83□□□□□ -0.03
TOP3B-202ENST00000398793 CT47A1Q5JQC4 288 aaPredicted RBP14.83□□□□□ -0.03
TOP3B-202ENST00000398793 ZHX3Q9H4I2 956 aa14.83□□□□□ -0.03
TOP3B-202ENST00000398793 ANO6Q4KMQ2 910 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 SHC4Q6S5L8 630 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 GADL1Q6ZQY3 521 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 PICK1Q9NRD5 415 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 STXBP3O00186 592 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 SYKP43405 635 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
TOP3B-202ENST00000398793 LONRF3Q496Y0 759 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 PHF20Q9BVI0 1012 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 PSTPIP2Q9H939 334 aa14.83□□□□□ -0.04
TOP3B-202ENST00000398793 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms