RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 BCRP11274 1271 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 OTUD6AQ7L8S5 288 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 COA7Q96BR5 231 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 KIAA1024Q9UPX6 916 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 EBAG9O00559 213 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 LIG4P49917 911 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 NR5A1Q13285 461 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 CUL4AQ13619 759 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 CFAP157Q5JU67 520 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 SFMBT2Q5VUG0 894 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 IFIH1Q9BYX4 1025 aaKnown RBP12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 PCDHA5Q9Y5H7 936 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 SH3BP5O60239 455 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 PFKFB2O60825 505 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 STAT1P42224 750 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 DPP9Q86TI2 863 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 CEP57Q86XR8 500 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 KIAA1524Q8TCG1 905 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 AS3MTQ9HBK9 375 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 ANKFY1Q9P2R3 1169 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 NDUFA8P51970 172 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 HLFQ16534 295 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 LCORLQ8N3X6 602 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 ARFGAP2Q8N6H7 521 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 MAP4K1Q92918 833 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 AIFM3Q96NN9 605 aa12.73□□□□□ -0.37
PCDHGA8-201ENST00000398604 ITSN1Q15811 1721 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 K7ENM7 598 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 LSG1Q9H089 658 aaKnown RBP12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 SYNJ2BP-COX16A0A087WUM0 186 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 ACTN4O43707 911 aaKnown RBP12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 ELF2Q15723 593 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 COX16Q9P0S2 106 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 C21orf2O43822 256 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 LRRC41Q15345 812 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 ODR4Q5SWX8 454 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 UBL4BQ8N7F7 174 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 RGS12O14924 1447 aa12.72□□□□□ -0.37
PCDHGA8-201ENST00000398604 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 GABPAQ06546 454 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 CAPN12Q6ZSI9 719 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 TTC14Q96N46 770 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 TUBB4AP04350 444 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 ANKS4BQ8N8V4 417 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 UHMK1Q8TAS1 419 aaKnown RBP12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 NUP58Q9BVL2 599 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 TSGA10Q9BZW7 698 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
PCDHGA8-201ENST00000398604 SNAP25P60880 206 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 ADAM9Q13443 819 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 TRIM14Q14142 442 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 OR8K1Q8NGG5 319 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 SSH2Q76I76 1423 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 PALLDQ8WX93 1383 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 BUB1O43683 1085 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 MAN1A1P33908 653 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 CCDC121Q6ZUS5 278 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 GPATCH11Q8N954 259 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 PFDN4Q9NQP4 134 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 PANK4Q9NVE7 773 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.38
PCDHGA8-201ENST00000398604 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms