RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 ATG7O95352 703 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 GCFC2P16383 781 aaKnown RBP12.05□□□□□ -0.48
MSL3-207ENST00000398527 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
MSL3-207ENST00000398527 SLMAPQ14BN4 828 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 KBTBD12Q3ZCT8 623 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 FAM114A1Q8IWE2 563 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 SLC26A4O43511 780 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 SNX1Q13596 522 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 Q6ZUG5 572 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 SH3GL1Q99961 368 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 MYH7P12883 1935 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 RNF113AO15541 343 aaKnown RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 ZNF189O75820 626 aaPredicted RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 MNAT1P51948 309 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 SOX10P56693 466 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 SLC7A5P1Q8MH63 180 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 DDX12PQ92771 950 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 RRP15Q9Y3B9 282 aaKnown RBP12.04□□□□□ -0.48
MSL3-207ENST00000398527 TAF6LQ9Y6J9 622 aa12.04□□□□□ -0.48
MSL3-207ENST00000398527 NPHP1O15259 732 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 SGTAO43765 313 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 ERLIN1O75477 346 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 GRM1Q13255 1194 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 TOMM20Q15388 145 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 KIAA0753Q2KHM9 967 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 GNPTABQ3T906 1256 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 CCDC68Q9H2F9 335 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 MAP3K15Q6ZN16 1313 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 AOC2O75106 756 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 LDHAP00338 332 aaKnown RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 ELF1P32519 619 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 TSPAN7P41732 249 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 MATR3P43243 847 aaKnown RBP eCLIP12.03□□□□□ -0.485e-11■■□□□ 12.5
MSL3-207ENST00000398527 TYRO3Q06418 890 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 EDC3Q96F86 508 aaKnown RBP12.03□□□□□ -0.48
MSL3-207ENST00000398527 CDHR2Q9BYE9 1310 aa12.03□□□□□ -0.48
MSL3-207ENST00000398527 GOLGA6L4A6NEF3 574 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 USP4Q13107 963 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 CRYMQ14894 314 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 TCEAL1Q15170 157 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 MAPRE1Q15691 268 aaKnown RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 CFAP58Q5T655 872 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 LILRB2Q8N423 598 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 BRF1Q92994 677 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 TNMDQ9H2S6 317 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 AS3MTQ9HBK9 375 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 ZNF304Q9HCX3 659 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 H0Y3Z8 333 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 RNASEH2AO75792 299 aaKnown RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 CSF1RP07333 972 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 TRIM21P19474 475 aaKnown RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 HOXC13P31276 330 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 SCRN1Q12765 414 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 STOX1Q6ZVD7 989 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.49
MSL3-207ENST00000398527 CLIP3Q96DZ5 547 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 BRIP1Q9BX63 1249 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
MSL3-207ENST00000398527 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
MSL3-207ENST00000398527 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
MSL3-207ENST00000398527 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
MSL3-207ENST00000398527 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
MSL3-207ENST00000398527 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
MSL3-207ENST00000398527 CDC25BP30305 580 aa12.01□□□□□ -0.49
MSL3-207ENST00000398527 RCN1Q15293 331 aa12.01□□□□□ -0.49
MSL3-207ENST00000398527 CLPPQ16740 277 aaPredicted RBP12.01□□□□□ -0.49
MSL3-207ENST00000398527 LLGL2Q6P1M3 1020 aa12.01□□□□□ -0.49
MSL3-207ENST00000398527 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms