RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
SMU1-201ENST00000397149 CSADQ9Y600 493 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 KRT14P02533 472 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 PDE1AP54750 535 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 TBK1Q9UHD2 729 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 MKL2Q9ULH7 1088 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 ANP32DO95626 131 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 LMNAP02545 664 aaKnown RBP13.43□□□□□ -0.26
SMU1-201ENST00000397149 PPP1R2P41236 205 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 FAM133BQ5BKY9 247 aaKnown RBP13.43□□□□□ -0.26
SMU1-201ENST00000397149 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 IGHDP01880 384 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 SLC5A4Q9NY91 659 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 CPP00450 1065 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 CARSP49589 748 aaKnown RBP13.43□□□□□ -0.26
SMU1-201ENST00000397149 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 RNF207Q6ZRF8 634 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 ORC4O43929 436 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 IFNA8P32881 189 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 EFHD1Q9BUP0 239 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 AKT3Q9Y243 479 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
SMU1-201ENST00000397149 ZNF18P17022 549 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMU1-201ENST00000397149 TRIML2Q8N7C3 387 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 KCNJ14Q9UNX9 436 aa13.43□□□□□ -0.26
SMU1-201ENST00000397149 ZNF263O14978 683 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 TMED2Q15363 201 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMU1-201ENST00000397149 TLK1Q9UKI8 766 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 CYP4F22Q6NT55 531 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 SPATS2Q86XZ4 545 aaKnown RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 MAPKAPK5Q8IW41 473 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PTPREP23469 700 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 GPBP1Q86WP2 473 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PDCD6IPQ8WUM4 868 aaKnown RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 hCG_2014768A0A024R1R8 64 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 CATSPER3Q86XQ3 398 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 TXLNGQ9NUQ3 528 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 KIF17Q9P2E2 1029 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 EFCAB14O75071 495 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 RLBP1P12271 317 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 ZSCAN26Q16670 478 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 UBE2Q2Q8WVN8 375 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 NUDCD1Q96RS6 583 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
SMU1-201ENST00000397149 ZCWPW1Q9H0M4 648 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 PCDHB4Q9Y5E5 795 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 DEXIO95424 95 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
SMU1-201ENST00000397149 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 PI4K2BG5E9Z4 385 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 MECOMQ03112 1051 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 MESDQ14696 234 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 BCAS4Q8TDM0 211 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 DDX28Q9NUL7 540 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 GOLGA8SH3BPF8 625 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 TSC22D1Q15714 1073 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 NEMP1O14524 444 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 DNAJC6O75061 913 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 HIBADHP31937 336 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 FAM47AQ5JRC9 791 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 PCGF5Q86SE9 256 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 CAPS2Q9BXY5 557 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 CHCHD3Q9NX63 227 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 A6NNZ2 444 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 TUBB8Q3ZCM7 444 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 GOLGA8QA0A0J9YX86 632 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 GOLGA8OA6NCC3 632 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 GOLGA8NF8WBI6 632 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 DIAPH2O60879 1101 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms