RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 LACRTQ9GZZ8 138 aa17.59■□□□□ 0.41
HOXA3-202ENST00000396352 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 MIIPQ5JXC2 388 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 ANKRD40Q6AI12 368 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 P2RX5Q93086 422 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 JAKMIP2Q96AA8 810 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 TRIM9Q9C026 710 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 CUEDC2Q9H467 287 aa17.58■□□□□ 0.41
HOXA3-202ENST00000396352 TSR1Q2NL82 804 aaKnown RBP17.58■□□□□ 0.4
HOXA3-202ENST00000396352 SMIM5Q71RC9 77 aa17.58■□□□□ 0.4
HOXA3-202ENST00000396352 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
HOXA3-202ENST00000396352 FAM71BQ8TC56 605 aa17.58■□□□□ 0.4
HOXA3-202ENST00000396352 ANKRD2Q9GZV1 360 aa17.58■□□□□ 0.4
HOXA3-202ENST00000396352 NHEJ1Q9H9Q4 299 aaPredicted RBP17.58■□□□□ 0.4
HOXA3-202ENST00000396352 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.4
HOXA3-202ENST00000396352 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.45e-10■□□□□ 10.8
HOXA3-202ENST00000396352 TRIM21P19474 475 aaKnown RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 CCNE1P24864 410 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 ACTN2P35609 894 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 NT5C2P49902 561 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 SH3RF3Q8TEJ3 882 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 CNOT6LQ96LI5 555 aaKnown RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 TRERF1Q96PN7 1200 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 TCP11L1Q9NUJ3 509 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 EIF3CLB5ME19 914 aaKnown RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 ZBED6P86452 979 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 STK4Q13043 487 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 CABP7Q86V35 215 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 EIF3CQ99613 913 aaKnown RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 NUP58Q9BVL2 599 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 KRT86O43790 486 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 KIAA1328Q86T90 577 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 ZSCAN29Q8IWY8 852 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 EHBP1Q8NDI1 1231 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 AK8Q96MA6 479 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 TMEM51Q9NW97 253 aa17.57■□□□□ 0.4
HOXA3-202ENST00000396352 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-202ENST00000396352 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
HOXA3-202ENST00000396352 CYLC1P35663 651 aaPredicted RBP17.56■□□□□ 0.4
HOXA3-202ENST00000396352 CCDC170Q8IYT3 715 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 C7orf25Q9BPX7 421 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 ZMYND12Q9H0C1 365 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 FCER1AP12319 257 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 PDE4DQ08499 809 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 TBC1D8BQ0IIM8 1120 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 MED4Q9NPJ6 270 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 DUSP10Q9Y6W6 482 aa17.56■□□□□ 0.4
HOXA3-202ENST00000396352 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 KCNQ4P56696 695 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 CAPZA3Q96KX2 299 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 ZC3H4Q9UPT8 1303 aaKnown RBP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 TARSL2A2RTX5 802 aaKnown RBP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 GOLGA8HP0CJ92 632 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 CCDC178Q5BJE1 867 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 ERGIC2Q96RQ1 377 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 MTMR7Q9Y216 660 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
HOXA3-202ENST00000396352 A0A1W2PQJ5 194 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 ZNF263O14978 683 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 CDK17Q00537 523 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 FIGNQ5HY92 759 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 RPGRIP1Q96KN7 1286 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
HOXA3-202ENST00000396352 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 MMTAG2Q9BU76 263 aaKnown RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 CPVLQ9H3G5 476 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 ZNHIT6Q9NWK9 470 aaKnown RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 PDE2AO00408 941 aaPredicted RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 RGL2O15211 777 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 ZNF185O15231 689 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 PHACTR2O75167 634 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 SYF2O95926 243 aaKnown RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 ASIC1P78348 528 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 CKAP4Q07065 602 aaKnown RBP17.54■□□□□ 0.4
HOXA3-202ENST00000396352 COBLL1Q53SF7 1204 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 HSP90B2PQ58FF3 399 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
HOXA3-202ENST00000396352 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms