RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 DSG3P32926 999 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
VAMP1-202ENST00000396308 PIK3AP1Q6ZUJ8 805 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 SHISA4Q96DD7 197 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
VAMP1-202ENST00000396308 VWA5AO00534 786 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 TOMM70O94826 608 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 HOXA7P31268 230 aaPredicted RBP17.61■□□□□ 0.41
VAMP1-202ENST00000396308 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
VAMP1-202ENST00000396308 AP3B2Q13367 1082 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 NPY5RQ15761 445 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 ANO1Q5XXA6 986 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 KCNG4Q8TDN1 519 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
VAMP1-202ENST00000396308 ATG4CQ96DT6 458 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 RTEL1Q9NZ71 1219 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
VAMP1-202ENST00000396308 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 ELP1O95163 1332 aa17.61■□□□□ 0.41
VAMP1-202ENST00000396308 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 PRPF40AO75400 957 aaKnown RBP17.6■□□□□ 0.41
VAMP1-202ENST00000396308 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-202ENST00000396308 SKOR2Q2VWA4 1001 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-202ENST00000396308 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 CST9Q5W186 159 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
VAMP1-202ENST00000396308 BIN2Q9UBW5 565 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-202ENST00000396308 PASKQ96RG2 1323 aa17.6■□□□□ 0.41
VAMP1-202ENST00000396308 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 MBD3O95983 291 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 ALAS1P13196 640 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
VAMP1-202ENST00000396308 FSTL1Q12841 308 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 CCL15Q16663 113 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 JAKMIP3Q5VZ66 844 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 SPRYD7Q5W111 196 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 LEO1Q8WVC0 666 aaPredicted RBP17.59■□□□□ 0.41
VAMP1-202ENST00000396308 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
VAMP1-202ENST00000396308 ABT1Q9ULW3 272 aaKnown RBP17.59■□□□□ 0.41
VAMP1-202ENST00000396308 SLC45A1Q9Y2W3 748 aa17.59■□□□□ 0.41
VAMP1-202ENST00000396308 SPDYE16A6NNV3 312 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-202ENST00000396308 GCOM1H8Y6P7 765 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-202ENST00000396308 M0R2N6 131 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 POLR2MP0CAP2 368 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 COPB2P35606 906 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 GJA5P36382 358 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 NASPP49321 788 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-202ENST00000396308 APLP1P51693 650 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 NBR1Q14596 966 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 PLS1Q14651 629 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.4
VAMP1-202ENST00000396308 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-202ENST00000396308 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
VAMP1-202ENST00000396308 TMEM88BA6NKF7 163 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 ATP2A1O14983 1001 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 SPTLC2O15270 562 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 CFBP00751 764 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 ME1P48163 572 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 UBE2HP62256 183 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
VAMP1-202ENST00000396308 ORC2Q13416 577 aaPredicted RBP17.57■□□□□ 0.4
VAMP1-202ENST00000396308 UBE2SQ16763 222 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 DNAJC5GQ8N7S2 189 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 CHAMP1Q96JM3 812 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
VAMP1-202ENST00000396308 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
VAMP1-202ENST00000396308 ZNF536O15090 1300 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
VAMP1-202ENST00000396308 HERVK_113P62684 666 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 INF2Q27J81 1249 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 LBX2Q6XYB7 198 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 SMCR8Q8TEV9 937 aaPredicted RBP17.56■□□□□ 0.4
VAMP1-202ENST00000396308 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 MAF1Q9H063 256 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 HOMER2Q9NSB8 354 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
VAMP1-202ENST00000396308 TMEM260Q9NX78 707 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms