RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 C19orf81C9J6K1 198 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 MEIS2O14770 477 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 USP2O75604 605 aaPredicted RBP13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 FDX1P10109 184 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 PTPRAP18433 802 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 USP11P51784 963 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 MDM2Q00987 491 aaPredicted RBP13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 IL17AQ16552 155 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 DCPSQ96C86 337 aaKnown RBP13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 MRVI1Q9Y6F6 885 aa13.52□□□□□ -0.25
GTF2A2-202ENST00000396060 CYP3A7-CYP3A51PA0A087WV96 503 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 CYP3A7P24462 503 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 BACE1P56817 501 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 AK8Q96MA6 479 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 MBOAT7Q96N66 472 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 MTMR9Q96QG7 549 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 FEZ1Q99689 392 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 TMEM260Q9NX78 707 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
GTF2A2-202ENST00000396060 GHRHRQ02643 423 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 GPR162Q16538 588 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 LONRF3Q496Y0 759 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 DTHD1Q6ZMT9 781 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
GTF2A2-202ENST00000396060 VWA3AA6NCI4 1184 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 OPLAHO14841 1288 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 CCNT1O60563 726 aaKnown RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 LETM2Q2VYF4 491 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SLF1Q9BQI6 1058 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 ANO10Q9NW15 660 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 MRPL11Q9Y3B7 192 aaKnown RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SCN4AP35499 1836 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 ABCB11O95342 1321 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 POLR2DO15514 142 aaKnown RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 ACTN4O43707 911 aaKnown RBP13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 NEMFO60524 1076 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 ICAM1P05362 532 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 EPHX2P34913 555 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SPP2Q13103 211 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 PDIA5Q14554 519 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 STX1AQ16623 288 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 UBE2SQ16763 222 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 SPECC1Q5M775 1068 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 CNNM3Q8NE01 707 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 MAF1Q9H063 256 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 AFG3L2Q9Y4W6 797 aa13.49□□□□□ -0.25
GTF2A2-202ENST00000396060 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 CYP3A4P08684 503 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 VCAM1P19320 739 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 CIITAP33076 1130 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 SNAP25P60880 206 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 E2F4Q16254 413 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
GTF2A2-202ENST00000396060 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms