RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 USP17L15C9J2P7 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L13C9JLJ4 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L11C9JVI0 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L18D6R9N7 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L22D6RA61 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L17D6RBQ6 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L19D6RCP7 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L20D6RJB6 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SLC37A4O43826 429 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L24Q0WX57 530 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 USP17L6PQ6QN14 398 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 CCDC112Q8NEF3 446 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 PPP1R13BQ96KQ4 1090 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SYT10Q6XYQ8 523 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-204ENST00000395756 NT5C2P49902 561 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 CCDC94Q9BW85 323 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-204ENST00000395756 CGNQ9P2M7 1197 aaKnown RBP20.16■□□□□ 0.82
SREBF1-204ENST00000395756 POTEMA6NI47 508 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 KMT5BQ4FZB7 885 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 TAB2Q9NYJ8 693 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 PI4KBQ9UBF8 816 aa20.16■□□□□ 0.82
SREBF1-204ENST00000395756 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 PAK1Q13153 545 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 NR1I3Q14994 352 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 CALCRLQ16602 461 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 USH1GQ495M9 461 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 DESI2Q9BSY9 194 aa20.15■□□□□ 0.82
SREBF1-204ENST00000395756 PMS1P54277 932 aaKnown RBP20.14■□□□□ 0.82
SREBF1-204ENST00000395756 DLEC1Q9Y238 1755 aa20.14■□□□□ 0.82
SREBF1-204ENST00000395756 ANKRD31Q8N7Z5 1873 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 PNMA6FA0A0J9YX94 578 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 YDJCA8MPS7 323 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 N4BP3O15049 544 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 DYMQ7RTS9 669 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 MTERF4Q7Z6M4 381 aaKnown RBP20.14■□□□□ 0.81
SREBF1-204ENST00000395756 IGSF22Q8N9C0 903 aa20.14■□□□□ 0.81
SREBF1-204ENST00000395756 BAG1Q99933 345 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-204ENST00000395756 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-204ENST00000395756 JAG1P78504 1218 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 ZNF658Q5TYW1 1059 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-204ENST00000395756 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 PSTPIP2Q9H939 334 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 MORC2Q9Y6X9 1032 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-204ENST00000395756 MYH1P12882 1939 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 ERCC3P19447 782 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 HMGB2P26583 209 aaKnown RBP20.13■□□□□ 0.81
SREBF1-204ENST00000395756 NOVP48745 357 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 ASIC1P78348 528 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 ICA1Q05084 483 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 STYK1Q6J9G0 422 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 NYAP1Q6ZVC0 841 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 LRWD1Q9UFC0 647 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 GH2P01242 217 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 SNHG28P0DPA3 235 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 RBL2Q08999 1139 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 MTF1Q14872 753 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 CSRNP1Q96S65 589 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 NUDT12Q9BQG2 462 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-204ENST00000395756 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
SREBF1-204ENST00000395756 TC2NQ8N9U0 490 aa20.12■□□□□ 0.81
SREBF1-204ENST00000395756 PPP1R1BQ9UD71 204 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-204ENST00000395756 FCER1AP12319 257 aa20.12■□□□□ 0.81
SREBF1-204ENST00000395756 SECISBP2LQ93073 1101 aaKnown RBP20.12■□□□□ 0.81
SREBF1-204ENST00000395756 PYM1Q9BRP8 204 aaKnown RBP20.12■□□□□ 0.81
SREBF1-204ENST00000395756 A0A1B0GTH6 734 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ZBTB5O15062 677 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 PDE4DQ08499 809 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 KRT31Q15323 416 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 QRICH1Q2TAL8 776 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 FILIP1LQ4L180 1135 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 APTXQ7Z2E3 356 aaKnown RBP20.11■□□□□ 0.81
SREBF1-204ENST00000395756 PPFIBP1Q86W92 1011 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ZNF710Q8N1W2 664 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 DNAI1Q9UI46 699 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ADAMTSL1Q8N6G6 1762 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 EDIL3O43854 480 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 KIF20AO95235 890 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ZYXQ15942 572 aaKnown RBP20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ABCB5Q2M3G0 1257 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 TOGARAM2Q6ZUX3 1019 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 KIF18AQ8NI77 898 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 RMND1Q9NWS8 449 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 F5H6K3 240 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 SSBP05455 408 aaKnown RBP eCLIP20.11■□□□□ 0.81
SREBF1-204ENST00000395756 KLRC3Q07444 240 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 MMTAG2Q9BU76 263 aaKnown RBP20.11■□□□□ 0.81
SREBF1-204ENST00000395756 CCSER1Q9C0I3 900 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 ADD3Q9UEY8 706 aaKnown RBP20.11■□□□□ 0.81
SREBF1-204ENST00000395756 PAXBP1Q9Y5B6 917 aa20.11■□□□□ 0.81
SREBF1-204ENST00000395756 IDEP14735 1019 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 MCM6Q14566 821 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 RRP1BQ14684 758 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms