RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 OSBPL7Q9BZF2 842 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 LRRC4CQ9HCJ2 640 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PCOLCE2Q9UKZ9 415 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PCDHGC5Q9Y5F6 944 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 TRPM7Q96QT4 1865 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 VCANP13611 3396 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 MAP3K19Q56UN5 1328 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 TM4SF1P30408 202 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
AP3S1-202ENST00000395548 ZNF252P-AS1Q0IIN9 211 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 TTLL4Q14679 1199 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 STK35Q8TDR2 534 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
AP3S1-202ENST00000395548 CNTNAP4Q9C0A0 1308 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 HUNKP57058 714 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 ERVK-24P63145 666 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 FGD1P98174 961 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 LRRC14Q15048 493 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
AP3S1-202ENST00000395548 KRTAP1-3Q8IUG1 177 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 SYNE4Q8N205 404 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 IP6K1Q92551 441 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 ZNF622Q969S3 477 aaKnown RBP eCLIP7.58□□□□□ -1.2
AP3S1-202ENST00000395548 LTV1Q96GA3 475 aaPredicted RBP7.58□□□□□ -1.2
AP3S1-202ENST00000395548 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 C12orf49Q9H741 205 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 SSU72Q9NP77 194 aaKnown RBP7.58□□□□□ -1.2
AP3S1-202ENST00000395548 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
AP3S1-202ENST00000395548 ZNF541Q9H0D2 1346 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 USP42Q9H9J4 1324 aaKnown RBP7.57□□□□□ -1.2
AP3S1-202ENST00000395548 CD163L1Q9NR16 1453 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 ENC1O14682 589 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 PAX4O43316 350 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
AP3S1-202ENST00000395548 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
AP3S1-202ENST00000395548 SCARA3Q6AZY7 606 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 RGMBQ6NW40 437 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 ZC3H7BQ9UGR2 993 aaKnown RBP7.57□□□□□ -1.2
AP3S1-202ENST00000395548 CEP290O15078 2479 aa7.57□□□□□ -1.2
AP3S1-202ENST00000395548 FAM208AQ9UK61 1670 aaKnown RBP7.57□□□□□ -1.2
AP3S1-202ENST00000395548 P4HBP07237 508 aaKnown RBP7.56□□□□□ -1.2
AP3S1-202ENST00000395548 FAM87AP0C7U9 286 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 TAL1P17542 331 aaPredicted RBP7.56□□□□□ -1.2
AP3S1-202ENST00000395548 BMP6P22004 513 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 TP53INP2Q8IXH6 220 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 DEFB123Q8N688 67 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
AP3S1-202ENST00000395548 ZNF408Q9H9D4 720 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 CACNA2D2Q9NY47 1150 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 CYP8B1Q9UNU6 501 aa7.56□□□□□ -1.2
AP3S1-202ENST00000395548 BRCA2P51587 3418 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
AP3S1-202ENST00000395548 EN2P19622 333 aaPredicted RBP7.55□□□□□ -1.2
AP3S1-202ENST00000395548 PDE6BP35913 854 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 LLGL2Q6P1M3 1020 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 PUS7Q96PZ0 661 aaKnown RBP7.55□□□□□ -1.2
AP3S1-202ENST00000395548 SRP68Q9UHB9 627 aaKnown RBP7.55□□□□□ -1.2
AP3S1-202ENST00000395548 ASAP1Q9ULH1 1129 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 FER1L6Q2WGJ9 1857 aa7.55□□□□□ -1.2
AP3S1-202ENST00000395548 MAP2P11137 1827 aaKnown RBP7.55□□□□□ -1.2
AP3S1-202ENST00000395548 DLEC1Q9Y238 1755 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 FZD9O00144 591 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 EIF5BO60841 1220 aaKnown RBP7.54□□□□□ -1.2
AP3S1-202ENST00000395548 FBXO24O75426 580 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 PAGE1O75459 146 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 USP17L7P0C7H9 530 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 EIF6P56537 245 aaKnown RBP7.54□□□□□ -1.2
AP3S1-202ENST00000395548 STK11IPQ8N1F8 1099 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 AGBL5Q8NDL9 886 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 ISL2Q96A47 359 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 PICK1Q9NRD5 415 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
AP3S1-202ENST00000395548 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
AP3S1-202ENST00000395548 AKAP11Q9UKA4 1901 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 PRPF40AO75400 957 aaKnown RBP7.53□□□□□ -1.2
AP3S1-202ENST00000395548 SERPINB2P05120 415 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 NEFMP07197 916 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 EIF4BP23588 611 aaKnown RBP7.53□□□□□ -1.2
AP3S1-202ENST00000395548 GNA15P30679 374 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 CCDC93Q567U6 631 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 ABI1Q8IZP0 508 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 JDP2Q8WYK2 163 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 PRO3102Q9H379 93 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 ADGRE2Q9UHX3 823 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 SLC5A6Q9Y289 635 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 CENPFP49454 3210 aa7.53□□□□□ -1.2
AP3S1-202ENST00000395548 HTTP42858 3142 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 FANCGO15287 622 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 CYP27B1O15528 508 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 FKTNO75072 461 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms