RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 RWDD2AQ9UIY3 292 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 ECE2O60344 883 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 TCP10Q12799 353 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 SH3BP5LQ7L8J4 393 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
SNCA-204ENST00000394989 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
SNCA-204ENST00000394989 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 MMTAG2Q9BU76 263 aaKnown RBP15.73■□□□□ 0.11
SNCA-204ENST00000394989 H0YIN7 160 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 NRDCO43847 1150 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 PLCG1P19174 1290 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 SLC16A2P36021 539 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 TECP42680 631 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 PAK1Q13153 545 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 STYK1Q6J9G0 422 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 AK8Q96MA6 479 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 ST7Q9NRC1 585 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
SNCA-204ENST00000394989 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 CABP7Q86V35 215 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 REXO1L1PQ8IX06 675 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 IGSF22Q8N9C0 903 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 RASSF8Q8NHQ8 419 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 NELFBQ8WX92 580 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 ZBTB9Q96C00 473 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 BAG1Q99933 345 aaPredicted RBP15.72■□□□□ 0.11
SNCA-204ENST00000394989 MRIQ9BWK5 157 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 TMEM51Q9NW97 253 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 SLC37A4O43826 429 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 KMT5BQ4FZB7 885 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 C7orf43Q8WVR3 580 aa15.72■□□□□ 0.11
SNCA-204ENST00000394989 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 FANCGO15287 622 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 ARHGAP6O43182 974 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 ADCY7P51828 1080 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 PMS1P54277 932 aaKnown RBP15.71■□□□□ 0.11
SNCA-204ENST00000394989 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
SNCA-204ENST00000394989 ADSSL1Q8N142 457 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.11
SNCA-204ENST00000394989 RGPD4Q7Z3J3 1758 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 TDP2O95551 362 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 ATP2B2Q01814 1243 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 KCNB1Q14721 858 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 KRT31Q15323 416 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 ANKRD7Q92527 254 aa15.71■□□□□ 0.11
SNCA-204ENST00000394989 TRIM49BA6NDI0 452 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 USP17L10C9JJH3 530 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 STX10O60499 249 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 CLK2P49760 499 aaKnown RBP15.71■□□□□ 0.1
SNCA-204ENST00000394989 AOC3Q16853 763 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 KIF18AQ8NI77 898 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 MTMR8Q96EF0 704 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.1
SNCA-204ENST00000394989 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.1
SNCA-204ENST00000394989 RHOBTB3O94955 611 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
SNCA-204ENST00000394989 UBE2SQ16763 222 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 TRIM65Q6PJ69 517 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 IRF2BP1Q8IU81 584 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 KIF2AO00139 706 aaPredicted RBP15.7■□□□□ 0.1
SNCA-204ENST00000394989 MYL1P05976 194 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 RBM5P52756 815 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNCA-204ENST00000394989 RBL2Q08999 1139 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 ORC2Q13416 577 aaPredicted RBP15.7■□□□□ 0.1
SNCA-204ENST00000394989 TOGARAM2Q6ZUX3 1019 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 RIC8AQ9NPQ8 531 aa15.7■□□□□ 0.1
SNCA-204ENST00000394989 TXKP42681 527 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 HDLBPQ00341 1268 aaKnown RBP15.69■□□□□ 0.1
SNCA-204ENST00000394989 TCP11X2Q5H9J9 407 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 GPATCH4Q5T3I0 446 aaKnown RBP15.69■□□□□ 0.1
SNCA-204ENST00000394989 GIMAP8Q8ND71 665 aaPredicted RBP15.69■□□□□ 0.1
SNCA-204ENST00000394989 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 TRIM9Q9C026 710 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 DHX36Q9H2U1 1008 aaKnown RBP15.69■□□□□ 0.1
SNCA-204ENST00000394989 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 ZBTB5O15062 677 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 EEF2P13639 858 aaKnown RBP15.69■□□□□ 0.1
SNCA-204ENST00000394989 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 PI4KBQ9UBF8 816 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 CUEDC2Q9H467 287 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 SERPINA10Q9UK55 444 aa15.69■□□□□ 0.1
SNCA-204ENST00000394989 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
SNCA-204ENST00000394989 GYPCP04921 128 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 CALCRLQ16602 461 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 TATDN1Q6P1N9 297 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 MKL1Q969V6 931 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 ZNF215Q9UL58 517 aaPredicted RBP15.68■□□□□ 0.1
SNCA-204ENST00000394989 KCNJ18B7U540 433 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 KCNJ12Q14500 433 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 MTF1Q14872 753 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms