RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 NOM1Q5C9Z4 860 aaKnown RBP22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 EARS2Q5JPH6 523 aaKnown RBP22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 PRAMEF18Q5VWM3 479 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 KRBA2Q6ZNG9 492 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 HEATR3Q7Z4Q2 680 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 KANSL2Q9H9L4 492 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 CABP5Q9NP86 173 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 MYH6P13533 1939 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 COL2A1P02458 1487 aaPredicted RBP22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 TTBK2Q6IQ55 1244 aa22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 TYW1BQ6NUM6 668 aa22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 TMEM179Q6ZVK1 233 aa22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 TEPSINQ96N21 525 aa22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 FOXP1Q9H334 677 aaPredicted RBP22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 HERC5Q9UII4 1024 aaKnown RBP22.52■■□□□ 1.19
CSNK1D-203ENST00000392334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.52■■□□□ 1.196e-7■■□□□ 12.4
CSNK1D-203ENST00000392334 KRT2P35908 639 aa22.51■■□□□ 1.19
CSNK1D-203ENST00000392334 SLC16A2P36021 539 aa22.51■■□□□ 1.19
CSNK1D-203ENST00000392334 TNNI2P48788 182 aa22.51■■□□□ 1.19
CSNK1D-203ENST00000392334 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
CSNK1D-203ENST00000392334 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.51■■□□□ 1.191e-7■■□□□ 12.2
CSNK1D-203ENST00000392334 V9GYY5 206 aaPredicted RBP22.51■■□□□ 1.19
CSNK1D-203ENST00000392334 POTECB2RU33 542 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 PNOCQ13519 176 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 NPY5RQ15761 445 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 CCDC96Q2M329 555 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 WWC2Q6AWC2 1192 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 DLK2Q6UY11 383 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 PIGSQ96S52 555 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 SERPINC1P01008 464 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 TOB1P50616 345 aaPredicted RBP22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 LZTS2Q9BRK4 669 aa22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 SRRTQ9BXP5 876 aaKnown RBP22.5■■□□□ 1.19
CSNK1D-203ENST00000392334 SNHG28P0DPA3 235 aa22.49■■□□□ 1.19
CSNK1D-203ENST00000392334 EPHX2P34913 555 aa22.49■■□□□ 1.19
CSNK1D-203ENST00000392334 FAM193AP78312 1265 aa22.49■■□□□ 1.19
CSNK1D-203ENST00000392334 KCNH3Q9ULD8 1083 aa22.49■■□□□ 1.19
CSNK1D-203ENST00000392334 SLFN14P0C7P3 912 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 MDM2Q00987 491 aaPredicted RBP22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 ZNF543Q08ER8 600 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 ISM2Q6H9L7 571 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 TRIM65Q6PJ69 517 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 KRI1Q8N9T8 703 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 NYAP2Q9P242 653 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 HOOK1Q9UJC3 728 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 LONRF3Q496Y0 759 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 ASPRV1Q53RT3 343 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 NBPF12Q5TAG4 269 aaPredicted RBP22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 CNNM3Q8NE01 707 aa22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 RRP36Q96EU6 259 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-203ENST00000392334 A0A1W2PRG0 241 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 ECE1P42892 770 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 CCDC84Q86UT8 332 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 REXO1L1PQ8IX06 675 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 RASGRP4Q8TDF6 673 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 CLIC6Q96NY7 704 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 NUP88Q99567 741 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 BRMS1Q9HCU9 246 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 PCDHA5Q9Y5H7 936 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 SLC1A4P43007 532 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 TBX2Q13207 712 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 NT5DC1Q5TFE4 455 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 SLFN13Q68D06 897 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 APOBEC3FQ8IUX4 373 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 SPICE1Q8N0Z3 855 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 MKL1Q969V6 931 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 SEC63Q9UGP8 760 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 PCDHB6Q9Y5E3 794 aa22.47■■□□□ 1.19
CSNK1D-203ENST00000392334 ARHGAP6O43182 974 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 ZSCAN12O43309 604 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 ERCC6LQ2NKX8 1250 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 TMEM139Q8IV31 216 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 ADGRF4Q8IZF3 695 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 TAF1DQ9H5J8 278 aaPredicted RBP22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 ZNF446Q9NWS9 450 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 BARHL2Q9NY43 387 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 FZD1Q9UP38 647 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 GREB1LQ9C091 1923 aaPredicted RBP22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 SCN4AP35499 1836 aa22.46■■□□□ 1.19
CSNK1D-203ENST00000392334 F5H6K3 240 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 STXBP3O00186 592 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 KLRC3Q07444 240 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 BMS1Q14692 1282 aaKnown RBP22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 EAPPQ56P03 285 aaPredicted RBP22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 PIK3AP1Q6ZUJ8 805 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 CREBRFQ8IUR6 639 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 RIOX1Q9H6W3 641 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 FANCLQ9NW38 375 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 TERF2Q15554 542 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 ACER1Q8TDN7 264 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 ZBTB21Q9ULJ3 1066 aa22.45■■□□□ 1.18
CSNK1D-203ENST00000392334 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 GOLGA6L9A6NEM1 432 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 WNT7AO00755 349 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 BMP6P22004 513 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 PTPREP23469 700 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 NAPAP54920 295 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 ZYXQ15942 572 aaKnown RBP22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms