RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 NAPAP54920 295 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 RWDD2AQ9UIY3 292 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 EFCAB8A8MWE9 144 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 KRT9P35527 623 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 GRAPQ13588 217 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 BAG3O95817 575 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 ERCC3P19447 782 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 EYA3Q99504 573 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
RAPGEF3-201ENST00000389212 M0R2N6 131 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PLCG1P19174 1290 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 CDK8P49336 464 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 KLK7P49862 253 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PICALMQ13492 652 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 LIMA1Q9UHB6 759 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 KIF5CO60282 957 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 SASH3O75995 380 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 TPM1P09493 284 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 TECP42680 631 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PARD6BQ9BYG5 372 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PDS5AQ29RF7 1337 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 PIGSQ96S52 555 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 LAMB1P07942 1786 aa13.1□□□□□ -0.31
RAPGEF3-201ENST00000389212 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 FCER1AP12319 257 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 SCP2P22307 547 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 TTC26A0AVF1 554 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 B4DLN1 442 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 KLRC4O43908 158 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-201ENST00000389212 RIMBP2O15034 1052 aa13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 MCTP2Q6DN12 878 aa13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 CABP7Q86V35 215 aa13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 RMND1Q9NWS8 449 aa13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.31
RAPGEF3-201ENST00000389212 GNAQP50148 359 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 GJA10Q969M2 543 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 COA7Q96BR5 231 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 LRRC4BQ9NT99 713 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 EIF3CLB5ME19 914 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 ASIC1P78348 528 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 VPS72Q15906 364 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 RSRC2Q7L4I2 434 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 EIF3CQ99613 913 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
RAPGEF3-201ENST00000389212 FLT1P17948 1338 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms