RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PLA2G6O60733 806 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 CD4P01730 458 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 MCCP23508 829 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 ITGA7Q13683 1181 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 CXCL17Q6UXB2 119 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 AGBL1Q96MI9 1066 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
VCX3A-201ENST00000381089 TTC28Q96AY4 2481 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.95■□□□□ 0.62
VCX3A-201ENST00000381089 TSPY2A6NKD2 308 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 CTAGE5O15320 804 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 FGBP02675 491 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 CYP2C18P33260 490 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 PBX2P40425 430 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 AKNAD1Q5T1N1 836 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 C20orf194Q5TEA3 1177 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 USP38Q8NB14 1042 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 HERVK_113Q902F9 699 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 GNEQ9Y223 722 aaKnown RBP18.95■□□□□ 0.62
VCX3A-201ENST00000381089 Q9Y3F1 56 aa18.95■□□□□ 0.62
VCX3A-201ENST00000381089 SOWAHBA6NEL2 793 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 GRXCR1A8MXD5 290 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 DYNC1LI2O43237 492 aaPredicted RBP18.94■□□□□ 0.62
VCX3A-201ENST00000381089 RCSD1Q6JBY9 416 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 SLC43A3Q8NBI5 491 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 ATXN2LQ8WWM7 1075 aaKnown RBP18.94■□□□□ 0.62
VCX3A-201ENST00000381089 PPM1EQ8WY54 764 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 PRDM12Q9H4Q4 367 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 SLC28A3Q9HAS3 691 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 ZNF536O15090 1300 aa18.94■□□□□ 0.62
VCX3A-201ENST00000381089 KCTD1Q719H9 257 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 RPUSD2Q8IZ73 545 aaKnown RBP18.93■□□□□ 0.62
VCX3A-201ENST00000381089 SEC62Q99442 399 aaKnown RBP18.93■□□□□ 0.62
VCX3A-201ENST00000381089 VTA1Q9NP79 307 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 CYP39A1Q9NYL5 469 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 THEGQ9P2T0 379 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 CCPG1Q9ULG6 757 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 MYO9BQ13459 2157 aa18.93■□□□□ 0.62
VCX3A-201ENST00000381089 TNFRSF10AO00220 468 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 SMPD1P17405 629 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 ZMYM1Q5SVZ6 1142 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 NSMFQ6X4W1 530 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 IL27Q8NEV9 243 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 CHMP4CQ96CF2 233 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
VCX3A-201ENST00000381089 PRR12Q9ULL5 1215 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 ASTN1O14525 1302 aa18.92■□□□□ 0.62
VCX3A-201ENST00000381089 IGFBP4P22692 258 aa18.91■□□□□ 0.62
VCX3A-201ENST00000381089 CCDC96Q2M329 555 aa18.91■□□□□ 0.62
VCX3A-201ENST00000381089 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
VCX3A-201ENST00000381089 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
VCX3A-201ENST00000381089 OTOP2Q7RTS6 562 aa18.91■□□□□ 0.62
VCX3A-201ENST00000381089 FBXO16Q8IX29 292 aaPredicted RBP18.91■□□□□ 0.62
VCX3A-201ENST00000381089 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
VCX3A-201ENST00000381089 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
VCX3A-201ENST00000381089 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
VCX3A-201ENST00000381089 ICAM1P05362 532 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 SUPT20HL2P0C7V6 817 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 CCL23P55773 120 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
VCX3A-201ENST00000381089 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 PI4K2BQ8TCG2 481 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 MPHOSPH6Q99547 160 aaKnown RBP18.9■□□□□ 0.62
VCX3A-201ENST00000381089 NOC4LQ9BVI4 516 aaKnown RBP18.9■□□□□ 0.62
VCX3A-201ENST00000381089 NKX2-4Q9H2Z4 354 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 PDGFCQ9NRA1 345 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 POLR3EQ9NVU0 708 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 CXXC1Q9P0U4 656 aaPredicted RBP18.9■□□□□ 0.62
VCX3A-201ENST00000381089 MTMR7Q9Y216 660 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 SLC4A7Q9Y6M7 1214 aa18.9■□□□□ 0.62
VCX3A-201ENST00000381089 LRRC37A2A6NM11 1700 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 B4GALT4O60513 344 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 SNAP25P60880 206 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 BRDTQ58F21 947 aaPredicted RBP18.89■□□□□ 0.61
VCX3A-201ENST00000381089 TAPT1Q6NXT6 567 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 TRPV6Q9H1D0 765 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
VCX3A-201ENST00000381089 PNMA2Q9UL42 364 aa18.89■□□□□ 0.61
VCX3A-201ENST00000381089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
VCX3A-201ENST00000381089 ZBBXA8MT70 800 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 PFKMP08237 780 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 MX1P20591 662 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 CPT1AP50416 773 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 MRPS5P82675 430 aaKnown RBP18.88■□□□□ 0.61
VCX3A-201ENST00000381089 CTDSPL2Q05D32 466 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 DUSP28Q4G0W2 176 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 PPP2R2DQ66LE6 453 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 ASB2Q96Q27 587 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 ALDH8A1Q9H2A2 487 aaPredicted RBP18.88■□□□□ 0.61
VCX3A-201ENST00000381089 IL17RBQ9NRM6 502 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 UMODL1Q5DID0 1318 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 RAD50Q92878 1312 aa18.88■□□□□ 0.61
VCX3A-201ENST00000381089 GRIN2DO15399 1336 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 NMT2O60551 498 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 PSMC6P62333 389 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 CCDC85BQ15834 202 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms