RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SCLT1Q96NL6 688 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 CHP1Q99653 195 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 H3BQF6 201 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-202ENST00000379826 CCDC121Q6ZUS5 278 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 TRIM31Q9BZY9 425 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
SMAD9-202ENST00000379826 CEP57Q86XR8 500 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 RIPOR2Q9Y4F9 1068 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 PDE6BP35913 854 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 NONOQ15233 471 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 GNA11P29992 359 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 E7EVH7 732 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 CYP2D6P10635 497 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 LRRC41Q15345 812 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
SMAD9-202ENST00000379826 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-202ENST00000379826 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
SMAD9-202ENST00000379826 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 PPANQ9NQ55 473 aaKnown RBP12.62□□□□□ -0.39
SMAD9-202ENST00000379826 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 GYPCP04921 128 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 KRT13P13646 458 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 SUSD4Q5VX71 490 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
SMAD9-202ENST00000379826 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 FUT8Q9BYC5 575 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 PCDHA4Q9UN74 947 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 GSTO1P78417 241 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 DPYDQ12882 1025 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 CALCRLQ16602 461 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 GOLGA8KD6RF30 607 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 TNNC1P63316 161 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 ASIC2Q16515 512 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 ABCC12Q96J65 1359 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
SMAD9-202ENST00000379826 DCPSQ96C86 337 aaKnown RBP12.62□□□□□ -0.39
SMAD9-202ENST00000379826 DYNLL2Q96FJ2 89 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 RPGRIP1Q96KN7 1286 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 CCDC114Q96M63 670 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
SMAD9-202ENST00000379826 CASP7P55210 303 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 EIF3CLB5ME19 914 aaKnown RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 NCK2O43639 380 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 CEP104O60308 925 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 RASGRP2Q7LDG7 609 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 P2RX5Q93086 422 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 EIF3CQ99613 913 aaKnown RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 MEGF6O75095 1541 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-202ENST00000379826 KLK7P49862 253 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 KRT12Q99456 494 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 SLC9C1Q4G0N8 1177 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
SMAD9-202ENST00000379826 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 PLCG1P19174 1290 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 EEF1GP26641 437 aaKnown RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 PRKG1Q13976 671 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 CEP85LQ5SZL2 805 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 FTCDO95954 541 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 ERVK-24P63145 666 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 PLS1Q14651 629 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 ARPP21Q9UBL0 812 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms