RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 OAS2P29728 719 aaKnown RBP20.39■□□□□ 0.85
TDP2-202ENST00000378198 MAPKAPK5Q8IW41 473 aa20.39■□□□□ 0.85
TDP2-202ENST00000378198 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.85
TDP2-202ENST00000378198 PES1O00541 588 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 POLR3GO15318 223 aaPredicted RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 TUBBP07437 444 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 GOLGA8HP0CJ92 632 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 SRGNP10124 158 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 PLCG1P19174 1290 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 ORC2Q13416 577 aaPredicted RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 GRIK5Q16478 980 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 FAM114A1Q8IWE2 563 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 NEDD1Q8NHV4 660 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 C7orf25Q9BPX7 421 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 MYO6Q9UM54 1294 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 REXO2Q9Y3B8 237 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 NHSQ6T4R5 1651 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 SMCO2A6NFE2 343 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 CCNT1O60563 726 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 CDK8P49336 464 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 AMPD3Q01432 767 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 AMPD2Q01433 879 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 ZNF662Q6ZS27 426 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 C16orf86Q6ZW13 317 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 PTF1AQ7RTS3 328 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 NEK8Q86SG6 692 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 CSGALNACT2Q8N6G5 542 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 P2RX5Q93086 422 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 RRP36Q96EU6 259 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 EYA3Q99504 573 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 DUSP9Q99956 384 aaKnown RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 TUBGCP2Q9BSJ2 902 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 TRIM9Q9C026 710 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 EXOC1Q9NV70 894 aa20.38■□□□□ 0.85
TDP2-202ENST00000378198 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.38■□□□□ 0.85
TDP2-202ENST00000378198 KRT83P78385 493 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 PDE4DQ08499 809 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 LETM2Q2VYF4 491 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 SNED1Q8TER0 1413 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 LRRC15Q8TF66 581 aa20.37■□□□□ 0.85
TDP2-202ENST00000378198 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
TDP2-202ENST00000378198 BTDP43251 543 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 MEA1Q16626 185 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 BEND6Q5SZJ8 279 aaPredicted RBP20.36■□□□□ 0.85
TDP2-202ENST00000378198 MSL3Q8N5Y2 521 aaKnown RBP20.36■□□□□ 0.85
TDP2-202ENST00000378198 SEC63Q9UGP8 760 aaKnown RBP20.36■□□□□ 0.85
TDP2-202ENST00000378198 GUCA1BQ9UMX6 200 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 GPR75-ASB3A0A0A6YYF3 556 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 PSMD14O00487 310 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 PLCG2P16885 1265 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 WDR59Q6PJI9 974 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 HDXQ7Z353 690 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 PNKPQ96T60 521 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 FOCADQ5VW36 1801 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 LY75O60449 1722 aa20.36■□□□□ 0.85
TDP2-202ENST00000378198 B4DLN1 442 aa20.35■□□□□ 0.85
TDP2-202ENST00000378198 NFIXQ14938 502 aa20.35■□□□□ 0.85
TDP2-202ENST00000378198 VPS72Q15906 364 aa20.35■□□□□ 0.85
TDP2-202ENST00000378198 GBP3Q9H0R5 595 aa20.35■□□□□ 0.85
TDP2-202ENST00000378198 CYLC1P35663 651 aaPredicted RBP20.34■□□□□ 0.85
TDP2-202ENST00000378198 ASIC1P78348 528 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 GPS2Q13227 327 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 ANKRD40Q6AI12 368 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 CALML4Q96GE6 196 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 TTYH3Q9C0H2 523 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 ZNHIT6Q9NWK9 470 aaKnown RBP20.34■□□□□ 0.85
TDP2-202ENST00000378198 hCG_1984214I3L0E3 225 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 RFC4P35249 363 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 HERVK_113P62684 666 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 TBC1D8BQ0IIM8 1120 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 CNNM4Q6P4Q7 775 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 TRAPPC11Q7Z392 1133 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 TEX11Q8IYF3 940 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 CCDC170Q8IYT3 715 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 ZNF713Q8N859 430 aaPredicted RBP20.34■□□□□ 0.85
TDP2-202ENST00000378198 EHBP1Q8NDI1 1231 aa20.34■□□□□ 0.85
TDP2-202ENST00000378198 ESYT2A0FGR8 921 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 ERICH4A6NGS2 130 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 TRIM21P19474 475 aaKnown RBP20.33■□□□□ 0.85
TDP2-202ENST00000378198 TECP42680 631 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 ZBED6P86452 979 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 IQCDQ96DY2 449 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 CNOT6LQ96LI5 555 aaKnown RBP20.33■□□□□ 0.85
TDP2-202ENST00000378198 CPVLQ9H3G5 476 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
TDP2-202ENST00000378198 KRT86O43790 486 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 RHOXF2BP0C7M4 288 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.84
TDP2-202ENST00000378198 NOVP48745 357 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 STK4Q13043 487 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 FIGNQ5HY92 759 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 CCDC122Q5T0U0 273 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 TBCKQ8TEA7 893 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms