RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 LAMB2P55268 1798 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 TYW1BQ6NUM6 668 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 IRF2BP1Q8IU81 584 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 CCDC24Q8N4L8 307 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 FAM107BQ9H098 131 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 ARPP21Q9UBL0 812 aaPredicted RBP18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 SAR1BQ9Y6B6 198 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 SRGAP2O75044 1071 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 NDUFA10O95299 355 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 RASSF8Q8NHQ8 419 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 MTMR7Q9Y216 660 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 PSMD14O00487 310 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 ZMYND10O75800 440 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 PMS1P54277 932 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 TRIM14Q14142 442 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 DISC1Q9NRI5 854 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 PCDHA4Q9UN74 947 aa18.56■□□□□ 0.56
PCDHA1-201ENST00000378133 ZC3H4Q9UPT8 1303 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 H7C1D1 291 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 NAALADL2Q58DX5 795 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 PNMA1Q8ND90 353 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 CAPZA3Q96KX2 299 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 TMEM60Q9H2L4 133 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 REXO2Q9Y3B8 237 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 TARSL2A2RTX5 802 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 ATP1A1P05023 1023 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 MMS22LQ6ZRQ5 1243 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 SUGP1Q8IWZ8 645 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 FAM76AQ8TAV0 307 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 DYNLL2Q96FJ2 89 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 HAUS4Q9H6D7 363 aa18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCDHA1-201ENST00000378133 CCDC194A0A1B0GVG4 234 aa18.54■□□□□ 0.56
PCDHA1-201ENST00000378133 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
PCDHA1-201ENST00000378133 ADSSL1Q8N142 457 aa18.54■□□□□ 0.56
PCDHA1-201ENST00000378133 LINC00116Q8NCU8 138 aa18.54■□□□□ 0.56
PCDHA1-201ENST00000378133 SHOX2O60902 331 aaPredicted RBP18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 CCT5P48643 541 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 INF2Q27J81 1249 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 GOLGA6CA6NDK9 693 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 GOLGA6DP0CG33 693 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 UBA7P41226 1012 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 CCDC122Q5T0U0 273 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 MB21D1Q8N884 522 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 NCAPGQ9BPX3 1015 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 GOLGA6AQ9NYA3 693 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 PCDHA6Q9UN73 950 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 PCDHA8Q9Y5H6 950 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 SCN7AQ01118 1682 aa18.53■□□□□ 0.56
PCDHA1-201ENST00000378133 AGPSO00116 658 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 EBAG9O00559 213 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 ERLIN2O94905 339 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 IRAK1P51617 712 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 PAPD7Q5XG87 772 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 CCNI2Q6ZMN8 369 aaPredicted RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 GSPT2Q8IYD1 628 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 SELENOOQ9BVL4 669 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 TFR2Q9UP52 801 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 M0R2N6 131 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 CKAP4Q07065 602 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 SLC35G1Q2M3R5 365 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 OR8K1Q8NGG5 319 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
PCDHA1-201ENST00000378133 RREB1Q92766 1687 aa18.52■□□□□ 0.55
PCDHA1-201ENST00000378133 KLRC4O43908 158 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 MYBL2P10244 700 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 LIG3P49916 1009 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 C12orf60Q5U649 245 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 CAGE1Q8TC20 777 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 JAKMIP2Q96AA8 810 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 MYCBPQ99417 103 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 GOLGA6BA6NDN3 693 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 CYTH3O43739 400 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 TRIM47Q96LD4 638 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 TSR1Q2NL82 804 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms