RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SESN3P58005 492 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 RBM6P78332 1123 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 TEKT1Q969V4 418 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 ENC1O14682 589 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SLC8A1P32418 973 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 RBL2Q08999 1139 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SLC1A4P43007 532 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 RPAINQ86UA6 219 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.31
PCDHA9-201ENST00000378122 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 GBP7Q8N8V2 638 aaPredicted RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 KCTD16Q68DU8 428 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 IQCDQ96DY2 449 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 TPX2Q9ULW0 747 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 RASSF2P50749 326 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 SATB1Q01826 763 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 C2orf54Q08AI8 447 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 PARP10Q53GL7 1025 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 SLC35F6Q8N357 371 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 CASP14P31944 242 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 CLTAP09496 248 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 PDIA3P30101 505 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 ITKQ08881 620 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 KRT12Q99456 494 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
PCDHA9-201ENST00000378122 OPHN1O60890 802 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 MYL3P08590 195 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 PEX19P40855 299 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 PALM2Q8IXS6 379 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 MAIP1Q8WWC4 291 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 M0R2C6 588 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 BNIP3LO60238 219 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 ADCY8P40145 1251 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 SYNMO15061 1565 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 ZMYND10O75800 440 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 RSAD2Q8WXG1 361 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 SETD1BQ9UPS6 1966 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 BAG2O95816 211 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 RASSF7Q02833 373 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 MAN1A1P33908 653 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 AFAP1L2Q8N4X5 818 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 RABGAP1Q9Y3P9 1069 aa13.13□□□□□ -0.31
PCDHA9-201ENST00000378122 CTSWP56202 376 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 CCDC85CA6NKD9 419 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 LGSNQ5TDP6 509 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 GUCY2DQ02846 1103 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 KCTD2Q14681 263 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 SUGCTQ9HAC7 445 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 ATP7AQ04656 1500 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
PCDHA9-201ENST00000378122 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms