RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
CLCN6-204ENST00000376491 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
CLCN6-204ENST00000376491 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
CLCN6-204ENST00000376491 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
CLCN6-204ENST00000376491 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 ASB14A6NK59 587 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 TNFAIP2Q03169 654 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 MFSD5Q6N075 450 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 PURBQ96QR8 312 aaKnown RBP17.68■□□□□ 0.42
CLCN6-204ENST00000376491 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.422e-8■■□□□ 12.3
CLCN6-204ENST00000376491 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 HELLSQ9NRZ9 838 aa17.68■□□□□ 0.42
CLCN6-204ENST00000376491 MYO9BQ13459 2157 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.67■□□□□ 0.42
CLCN6-204ENST00000376491 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.67■□□□□ 0.42
CLCN6-204ENST00000376491 SMPD1P17405 629 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 TMEM63BQ5T3F8 832 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 MAFAQ8NHW3 353 aaPredicted RBP17.67■□□□□ 0.42
CLCN6-204ENST00000376491 CYP39A1Q9NYL5 469 aa17.67■□□□□ 0.42
CLCN6-204ENST00000376491 CD4P01730 458 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 FGAP02671 866 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 SLC16A2P36021 539 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 TMEM240Q5SV17 173 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 CXCL17Q6UXB2 119 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
CLCN6-204ENST00000376491 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 PPP1R12CQ9BZL4 782 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
CLCN6-204ENST00000376491 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
CLCN6-204ENST00000376491 TMEM265A0A087WTH1 108 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 ICAM1P05362 532 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 CSF2RAP15509 400 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.423e-7■■■□□ 15.5
CLCN6-204ENST00000376491 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 NSMFQ6X4W1 530 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 SLC43A3Q8NBI5 491 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 MORC4Q8TE76 937 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 TMEM47Q9BQJ4 181 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 ZBTB47Q9UFB7 747 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-204ENST00000376491 GRIN2DO15399 1336 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 PRUNE2Q8WUY3 3088 aa17.65■□□□□ 0.42
CLCN6-204ENST00000376491 ACRP10323 421 aa17.64■□□□□ 0.41
CLCN6-204ENST00000376491 HSPD1P10809 573 aaKnown RBP17.64■□□□□ 0.41
CLCN6-204ENST00000376491 DNAJB2P25686 324 aa17.64■□□□□ 0.41
CLCN6-204ENST00000376491 GRIN2CQ14957 1233 aa17.64■□□□□ 0.41
CLCN6-204ENST00000376491 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.41
CLCN6-204ENST00000376491 RASIP1Q5U651 963 aa17.64■□□□□ 0.41
CLCN6-204ENST00000376491 TCP11L1Q9NUJ3 509 aa17.64■□□□□ 0.41
CLCN6-204ENST00000376491 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
CLCN6-204ENST00000376491 GRXCR1A8MXD5 290 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 NFIBO00712 420 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 TLR3O15455 904 aaKnown RBP17.63■□□□□ 0.41
CLCN6-204ENST00000376491 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
CLCN6-204ENST00000376491 FOSL2P15408 326 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 CYP2C18P33260 490 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
CLCN6-204ENST00000376491 ITGA7Q13683 1181 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
CLCN6-204ENST00000376491 SYDE2Q5VT97 1194 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 IQSEC1Q6DN90 963 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 ZNF365Q70YC5 407 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 TMEM199Q8N511 208 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 UMODL1Q5DID0 1318 aa17.63■□□□□ 0.41
CLCN6-204ENST00000376491 CABYRO75952 493 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 PDHBP11177 359 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 PBX2P40425 430 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 HAND2P61296 217 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 KIAA1211Q6ZU35 1233 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 AP5M1Q9H0R1 490 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 VTA1Q9NP79 307 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 Q9Y3F1 56 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 GBF1Q92538 1859 aa17.62■□□□□ 0.41
CLCN6-204ENST00000376491 ALDH5A1P51649 535 aaPredicted RBP17.61■□□□□ 0.41
CLCN6-204ENST00000376491 PSMC6P62333 389 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 CLEC4DQ8WXI8 215 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 TIFAQ96CG3 184 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 PBX4Q9BYU1 374 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 ZNF576Q9H609 170 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
CLCN6-204ENST00000376491 B4GALT4O60513 344 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 DUSP28Q4G0W2 176 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms