RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PLIN4Q96Q06 1357 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 MINDY4BA8MYZ0 360 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 CTAGE5O15320 804 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 GPAA1O43292 621 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 TTLL1O95922 423 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 PBX2P40425 430 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 CCDC144CPQ8IYA2 1237 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 ASB2Q96Q27 587 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 HELLSQ9NRZ9 838 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
LSM2-208ENST00000375661 ASB14A6NK59 587 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 GRXCR1A8MXD5 290 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 ZEB2O60315 1214 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 FGBP02675 491 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
LSM2-208ENST00000375661 MRPS5P82675 430 aaKnown RBP14.37□□□□□ -0.11
LSM2-208ENST00000375661 TNFAIP2Q03169 654 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 FAM133AQ8N9E0 248 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 CEP95Q96GE4 821 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 ACAD9Q9H845 621 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 Q9Y3F1 56 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 TTC28Q96AY4 2481 aa14.37□□□□□ -0.11
LSM2-208ENST00000375661 HIP1O00291 1037 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 ACRP10323 421 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 BMP3P12645 472 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 COL9A1P20849 921 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 CHMLP26374 656 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 STAT2P52630 851 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
LSM2-208ENST00000375661 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
LSM2-208ENST00000375661 FAM160B2Q86V87 743 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 IL25Q9H293 177 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 DIAPH3Q9NSV4 1193 aa14.36□□□□□ -0.11
LSM2-208ENST00000375661 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
LSM2-208ENST00000375661 LCTP09848 1927 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 FOXP2O15409 715 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 PLA2G6O60733 806 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 CYP2C18P33260 490 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 TDO2P48775 406 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 PDE4BQ07343 736 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 RPUSD2Q8IZ73 545 aaKnown RBP14.35□□□□□ -0.11
LSM2-208ENST00000375661 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 PPM1EQ8WY54 764 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
LSM2-208ENST00000375661 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
LSM2-208ENST00000375661 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 BEX3Q00994 111 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 ADGRE1Q14246 886 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 NOL8Q76FK4 1167 aaKnown RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 STAG1Q8WVM7 1258 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 EPB41L4AQ9HCS5 686 aaPredicted RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 RNF146Q9NTX7 359 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 CXXC1Q9P0U4 656 aaPredicted RBP14.34□□□□□ -0.11
LSM2-208ENST00000375661 ASTN1O14525 1302 aa14.34□□□□□ -0.11
LSM2-208ENST00000375661 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
LSM2-208ENST00000375661 SOWAHBA6NEL2 793 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 SLC3A2P08195 630 aaKnown RBP14.33□□□□□ -0.12
LSM2-208ENST00000375661 PFKMP08237 780 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 HOMER2Q9NSB8 354 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 PCDHA11Q9Y5I1 949 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 ZNF536O15090 1300 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 CCDC171Q6TFL3 1326 aa14.33□□□□□ -0.12
LSM2-208ENST00000375661 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 PRDM1O75626 825 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 APPP05067 770 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 SMPD1P17405 629 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 IGFBP4P22692 258 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 SLC1A4P43007 532 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
LSM2-208ENST00000375661 OTOP2Q7RTS6 562 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms