RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
MCF2L-202ENST00000375597 GBP3Q9H0R5 595 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 TUBB4AP04350 444 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 RAPGEF1Q13905 1077 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 ODF2Q5BJF6 829 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 FBXW10Q5XX13 1052 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
MCF2L-202ENST00000375597 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 GNAT2P19087 354 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 SNAP25P60880 206 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 TRADDQ15628 312 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-202ENST00000375597 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-202ENST00000375597 KCNJ6P48051 423 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 MNAT1P51948 309 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 IKQ13123 557 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-202ENST00000375597 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 DISC1Q9NRI5 854 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 ADAMTS7Q9UKP4 1686 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 TAL1P17542 331 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-202ENST00000375597 SLC16A2P36021 539 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 GUCY2DQ02846 1103 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 SEC23AQ15436 765 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
MCF2L-202ENST00000375597 TRAF5O00463 557 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 MAGEA1P43355 309 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 SPAG1Q07617 926 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 EHHADHQ08426 723 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 UBE2SQ16763 222 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-202ENST00000375597 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-202ENST00000375597 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
MCF2L-202ENST00000375597 ATP2C1P98194 919 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-202ENST00000375597 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
MCF2L-202ENST00000375597 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 GRIK5Q16478 980 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 IRF2BP1Q8IU81 584 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 MRC1P22897 1456 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
MCF2L-202ENST00000375597 SLIT3O75094 1523 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 NDUFAB1O14561 156 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 PDE6BP35913 854 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 PLS1Q14651 629 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-202ENST00000375597 ARL8AQ96BM9 186 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
MCF2L-202ENST00000375597 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 KIF5BP33176 963 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-202ENST00000375597 KRT12Q99456 494 aa13.12□□□□□ -0.31
MCF2L-202ENST00000375597 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 FAM196BA6NMK8 535 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 TACC1O75410 805 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 FGFR2P21802 821 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 USP14P54578 494 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 KRT83P78385 493 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 PIGSQ96S52 555 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 STK36Q9NRP7 1315 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 SLC1A4P43007 532 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 SIK1P57059 783 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 POLR2FP61218 127 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 GUCY1A3Q02108 690 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 DCAF17Q5H9S7 520 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 DDX42Q86XP3 938 aaKnown RBP eCLIP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms