RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TEX11Q8IYF3 940 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 KCNK3O14649 394 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 RFC1P35251 1148 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 GAP43P17677 238 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 SLC26A4O43511 780 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ANKRD7Q92527 254 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 RILPQ96NA2 401 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 JPH2Q9BR39 696 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ARHGAP42A6NI28 874 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 MAP7D3Q8IWC1 876 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 PNOCQ13519 176 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 CCDC93Q567U6 631 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 NDUFA10O95299 355 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 ATF2P15336 505 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 CYP2C19P33261 490 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 LIFRP42702 1097 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 OSBPL9Q96SU4 736 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TRIM15Q9C019 465 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 UNC13BO14795 1591 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TTC4O95801 387 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 EXOC8Q8IYI6 725 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 SH3GLB2Q9NR46 395 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 RAB20Q9NX57 234 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PPP1R12AO14974 1030 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 NEO1Q92859 1461 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 NDUFA8P51970 172 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 GUCY2DQ02846 1103 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 LETM2Q2VYF4 491 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 ZNF790Q6PG37 636 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PCGF5Q86SE9 256 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 GCKRQ14397 625 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 DCUN1D2Q6PH85 259 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 EYA3Q99504 573 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 TNNI2P48788 182 aa11.12□□□□□ -0.63
PTCH1-204ENST00000375290 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-204ENST00000375290 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 HEXIM1O94992 359 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 PYGBP11216 843 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 MRPS25P82663 173 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 RAPGEF3O95398 923 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 RPN1P04843 607 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 CASP14P31944 242 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 PDE8AO60658 829 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 CRCPO75575 148 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 CABP7Q86V35 215 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 BLIDQ8IZY5 108 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 FOXP3Q9BZS1 431 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SERPING1P05155 500 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 ADCY8P40145 1251 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 LRMPQ12912 555 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 GFAPP14136 432 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SLC12A2P55011 1212 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 ZNF174Q15697 407 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 KLHL7Q8IXQ5 586 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 LZICQ8WZA0 190 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
PTCH1-204ENST00000375290 MRPL47Q9HD33 250 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 SRPRBQ9Y5M8 271 aaKnown RBP11.11□□□□□ -0.63
PTCH1-204ENST00000375290 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 IPO11Q9UI26 975 aaKnown RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 NEK8Q86SG6 692 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 MBD4O95243 580 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 CHGBP05060 677 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms