RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 DYNLL1P63167 89 aaKnown RBP16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 ICA1Q05084 483 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 KRT33BQ14525 404 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 TPCN1Q9ULQ1 816 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 RGS16O15492 202 aaPredicted RBP16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 FAM178BQ8IXR5 827 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 DPF3Q92784 378 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 RMDN2Q96LZ7 410 aa16.14■□□□□ 0.17
NOTCH4-201ENST00000375023 TNKSO95271 1327 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 GNPTABQ3T906 1256 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 DYNLT1P63172 113 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 PAK2Q13177 524 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 B4GALNT4Q76KP1 1039 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 RASSF4Q9H2L5 321 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 ZMYND10O75800 440 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 MYBP10242 640 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 PDE6CP51160 858 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 ANKRD20A3Q5VUR7 823 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 POC1B-GALNT4F8VUJ3 575 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 DMP1Q13316 513 aaPredicted RBP16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 INPP5FQ9Y2H2 1132 aa16.13■□□□□ 0.17
NOTCH4-201ENST00000375023 ENC1O14682 589 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 CLIC2O15247 247 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 TMEM63CQ9P1W3 806 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 H7C0C1 242 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 ATP5OP48047 213 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 MARK3P27448 753 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 FAM117BQ6P1L5 589 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 TLR7Q9NYK1 1049 aaKnown RBP16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 ECE1P42892 770 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 NDUFA8P51970 172 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 HDAC11Q96DB2 347 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 TESK2Q96S53 571 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 KIAA1024Q9UPX6 916 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 PHKA1P46020 1223 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 LGSNQ5TDP6 509 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 PCDHB4Q9Y5E5 795 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 TUBB4AP04350 444 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 RASSF7Q02833 373 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 PABPC4Q13310 644 aaKnown RBP eCLIP16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 MESDQ14696 234 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 RAPH1Q70E73 1250 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 RNF217Q8TC41 542 aa16.12■□□□□ 0.17
NOTCH4-201ENST00000375023 LRRN2O75325 713 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 GABPB2Q8TAK5 448 aaPredicted RBP16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 THAP12O43422 761 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 KCTD16Q68DU8 428 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 RFX6Q8HWS3 928 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 TEKT3Q9BXF9 490 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 ADAM9Q13443 819 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 MTRQ99707 1265 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 LMBRD1Q9NUN5 540 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 ACBD5Q5T8D3 534 aaPredicted RBP16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
NOTCH4-201ENST00000375023 SGK1O00141 431 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 KIF3CO14782 793 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 PDE6AP16499 860 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 LMNTD2Q8IXW0 634 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 PPP4R1Q8TF05 950 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 ATP2A3Q93084 1043 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 LZTS2Q9BRK4 669 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 ADPGKQ9BRR6 497 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 ATP10BO94823 1461 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 GIGYF1O75420 1035 aaPredicted RBP16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 FGAP02671 866 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 PTGDRQ13258 359 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 JADE1Q6IE81 842 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 GLT8D2Q9H1C3 349 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 M0R2C6 588 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 TRIM56Q9BRZ2 755 aaKnown RBP16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
NOTCH4-201ENST00000375023 CDC25AP30304 524 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms