RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 MTRQ99707 1265 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC40-203ENST00000374877 CORO7P57737 925 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 HERVK_113P62684 666 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 ZNF658Q5TYW1 1059 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-203ENST00000374877 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 RASSF8Q8NHQ8 419 aa12.42□□□□□ -0.42
CCDC40-203ENST00000374877 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-203ENST00000374877 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
CCDC40-203ENST00000374877 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 RPN1P04843 607 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 BCAMP50895 628 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 E2F4Q16254 413 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 IFIT1BQ5T764 474 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 PPM1EQ8WY54 764 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 ZNF185O15231 689 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 GTF2A1P52655 376 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 RCAN1P53805 252 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 DNAJC21Q5F1R6 531 aaKnown RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 PDXDC2PQ6P474 469 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 ENAHQ8N8S7 591 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 RABEP2Q9H5N1 569 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 CHD4Q14839 1912 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-203ENST00000374877 KRT86O43790 486 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 MYBL2P10244 700 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 SEC23AQ15436 765 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
CCDC40-203ENST00000374877 C10orf71Q711Q0 1435 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 MACROD2A1Z1Q3 448 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 PRPF3O43395 683 aaKnown RBP12.4□□□□□ -0.42
CCDC40-203ENST00000374877 CYP7A1P22680 504 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 ICE2Q659A1 982 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 ABCF2Q9UG63 623 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-203ENST00000374877 STAT6P42226 847 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 NLRP5P59047 1200 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 KRT83P78385 493 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 C2orf54Q08AI8 447 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 FAM76AQ8TAV0 307 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 TRIM47Q96LD4 638 aa12.4□□□□□ -0.42
CCDC40-203ENST00000374877 PCMTD1Q96MG8 357 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-203ENST00000374877 ZSCAN10Q96SZ4 725 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-203ENST00000374877 CYP2D7A0A087X1C5 515 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 LGALS16A8MUM7 142 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 H7C1D1 291 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 IDEP14735 1019 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 TRIM21P19474 475 aaKnown RBP12.4□□□□□ -0.43
CCDC40-203ENST00000374877 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 MAGEC2Q9UBF1 373 aaPredicted RBP12.4□□□□□ -0.43
CCDC40-203ENST00000374877 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 MYH6P13533 1939 aa12.4□□□□□ -0.43
CCDC40-203ENST00000374877 GOLGA6CA6NDK9 693 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GOLGA6DP0CG33 693 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GYG1P46976 350 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GPSM2P81274 684 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 FUT2Q10981 343 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 PAPD7Q5XG87 772 aaKnown RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 WDR59Q6PJI9 974 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 C2CD5Q86YS7 1000 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GOLGA6BA6NDN3 693 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 H0YIN7 160 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 CYLC1P35663 651 aaPredicted RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 IL17AQ16552 155 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 MICALL1Q8N3F8 863 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 PLIN2Q99541 437 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
CCDC40-203ENST00000374877 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 DUSP10Q9Y6W6 482 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
CCDC40-203ENST00000374877 TARSL2A2RTX5 802 aaKnown RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 B4DLN1 442 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms