RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CRKP46108 304 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 KLK7P49862 253 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 ADCY7P51828 1080 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 STK4Q13043 487 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 SPATA20Q8TB22 786 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 KANSL2Q9H9L4 492 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 EXOC1Q9NV70 894 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 B4DLN1 442 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 CASQ1P31415 396 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 KRT9P35527 623 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 SLC1A4P43007 532 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 SEPT2Q15019 361 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 ENOX2Q16206 610 aaKnown RBP13.21□□□□□ -0.3
PDE6C-201ENST00000371447 ARHGAP29Q52LW3 1261 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 CRAMP1Q96RY5 1269 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 MAP7D2Q96T17 732 aa13.21□□□□□ -0.3
PDE6C-201ENST00000371447 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.3
PDE6C-201ENST00000371447 ZSCAN12O43309 604 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
PDE6C-201ENST00000371447 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 ARAP2Q8WZ64 1704 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
PDE6C-201ENST00000371447 TTLL1O95922 423 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 COPB1P53618 953 aaKnown RBP13.2□□□□□ -0.3
PDE6C-201ENST00000371447 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
PDE6C-201ENST00000371447 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
PDE6C-201ENST00000371447 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 C21orf2O43822 256 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 RAD17O75943 681 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 SNX29Q8TEQ0 813 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 GYPCP04921 128 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 UBXN4Q92575 508 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 CHP1Q99653 195 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 PSMA7O14818 248 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 NPR1P16066 1061 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 SHMT1P34896 483 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 STIM1Q13586 685 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 ARL6IP4Q66PJ3 421 aaKnown RBP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 FCHSD1Q86WN1 690 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 HINFPQ9BQA5 517 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
PDE6C-201ENST00000371447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDE6C-201ENST00000371447 PPP1R11O60927 126 aaPredicted RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 STAT3P40763 770 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 UBXN2AP68543 259 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 H0YIN7 160 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 TRIM65Q6PJ69 517 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 ECE2O60344 883 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 CCDC175P0C221 793 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
PDE6C-201ENST00000371447 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
PDE6C-201ENST00000371447 PCNTO95613 3336 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 M0R2N6 131 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 MEIS1O00470 390 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 STX10O60499 249 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 TBX2Q13207 712 aaPredicted RBP13.17□□□□□ -0.3
PDE6C-201ENST00000371447 ANKRD40Q6AI12 368 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms