RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DEXIO95424 95 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 MYBP10242 640 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP2R5AQ15172 486 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 SEC23AQ15436 765 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 ASTE1Q2TB18 679 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 MYH4Q9Y623 1939 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 MGRN1O60291 552 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 PDE6AP16499 860 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 CAGE1Q8TC20 777 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 CWC25Q9NXE8 425 aaPredicted RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 USP8P40818 1118 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 OR2W6PQ8NHA6 318 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 COL4A1P02462 1669 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TRIM75PA6NK02 468 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 F8W031 263 aaPredicted RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 OPA1O60313 960 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 GRIK3Q13003 919 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 FANCBQ8NB91 859 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 MAGEC3Q8TD91 643 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMOD1P28289 359 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 HNRNPH3P31942 346 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ALX1Q15699 326 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 RTN1Q16799 776 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 LRP5O75197 1615 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CDK17Q00537 523 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 XRCC4Q13426 336 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 C1orf131Q8NDD1 294 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CCT6BQ92526 530 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 LPIN2Q92539 896 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KCNMB3Q9NPA1 279 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 RREB1Q92766 1687 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SLIT2O94813 1529 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP1R12AO14974 1030 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 FLT3P36888 993 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KRT83P78385 493 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 EVX2Q03828 476 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 H7C1D1 291 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 SCTRP47872 440 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 FAM69CQ0P6D2 419 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP85LQ5SZL2 805 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 E2F5Q15329 346 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CICQ96RK0 1608 aaPredicted RBP12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 HSF2BPO75031 334 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZPR1O75312 459 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CSF1RP07333 972 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PHKA1P46020 1223 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 MTFR1LQ9H019 292 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 E7EVH7 732 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 H0YHG0 523 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBED6P86452 979 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CRYMQ14894 314 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 LACTB2Q53H82 288 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 RNF187Q5TA31 235 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms