RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TMX1Q9H3N1 280 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 GOLPH3LQ9H4A5 285 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 COL14A1Q05707 1796 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 TCRBV5S4A2TA0A5A2 114 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 ZBTB5O15062 677 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 STX10O60499 249 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 NMT2O60551 498 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 GYS1P13807 737 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 STAT2P52630 851 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 USP14P54578 494 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 GABPB1Q06547 395 aaPredicted RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 DALRD3Q5D0E6 543 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 CIAPIN1Q6FI81 312 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 KCTD1Q719H9 257 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 GPBP1Q86WP2 473 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SLC44A5Q8NCS7 719 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 OR8K1Q8NGG5 319 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 PAGE5Q96GU1 130 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 RIOK1Q9BRS2 568 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 PYCARDQ9ULZ3 195 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 AK9Q5TCS8 1911 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 FLT1P17948 1338 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SALL1Q9NSC2 1324 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 KIF28PB7ZC32 967 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 BACH1O14867 736 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC122Q5T0U0 273 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 NSMFQ6X4W1 530 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 NLRX1Q86UT6 975 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 PLVAPQ9BX97 442 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 DISC1Q9NRI5 854 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 PIM2Q9P1W9 311 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 RWDD2AQ9UIY3 292 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 GUCA1BQ9UMX6 200 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 COL4A3BPQ9Y5P4 624 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 CLRN2A0PK11 232 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 TMCO5BA8MYB1 307 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 C21orf2O43822 256 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 RAD17O75943 681 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 ASNSP08243 561 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 PSMD2Q13200 908 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 CDC37Q16543 378 aaPredicted RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 FAM26FQ5R3K3 315 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 GOLGA5Q8TBA6 731 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 OXER1Q8TDS5 423 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC102AQ96A19 550 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 COA7Q96BR5 231 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 EPSTI1Q96J88 318 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 PHF20Q9BVI0 1012 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 MRPL44Q9H9J2 332 aaKnown RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 ARFGAP3Q9NP61 516 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 RIC8AQ9NPQ8 531 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 HERC5Q9UII4 1024 aaKnown RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 USP17L5A8MUK1 530 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 GDF11O95390 407 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 SLC16A2P36021 539 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 ATP2C1P98194 919 aaPredicted RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 HDLBPQ00341 1268 aaKnown RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 LRMPQ12912 555 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 SLC9C1Q4G0N8 1177 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 DCAF17Q5H9S7 520 aaPredicted RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 PLA2G4DQ86XP0 818 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 SRBD1Q8N5C6 995 aaKnown RBP5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 MYCT1Q8N699 235 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 TEKT3Q9BXF9 490 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 WDR11Q9BZH6 1224 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 PANK4Q9NVE7 773 aa5.9□□□□□ -1.46
SMNDC1-202ENST00000369603 A0A0G2JLW4 131 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 MYCLP12524 364 aaPredicted RBP5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 PPP2R3AQ06190 1150 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 GNPTABQ3T906 1256 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 RETREG2Q8NC44 543 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 KIAA1524Q8TCG1 905 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 IFT74Q96LB3 600 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 NAPGQ99747 312 aaPredicted RBP5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 IMPG2Q9BZV3 1241 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 OSBPL5Q9H0X9 879 aaPredicted RBP5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 TAOK3Q9H2K8 898 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 CCPG1Q9ULG6 757 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 ZBTB21Q9ULJ3 1066 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 PCDHB13Q9Y5F0 798 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 CSADQ9Y600 493 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 RIC1Q4ADV7 1423 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 GUCY1A2P33402 732 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 COPB1P53618 953 aaKnown RBP5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 SHC4Q6S5L8 630 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 MIER3Q7Z3K6 550 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 TPH2Q8IWU9 490 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 P2RX5Q93086 422 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 METTL14Q9HCE5 456 aaKnown RBP5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 MTMR4Q9NYA4 1195 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 LRRC37A3O60309 1634 aa5.9□□□□□ -1.47
SMNDC1-202ENST00000369603 ENTPD3O75355 529 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 GCNT3O95395 438 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ALAS1P13196 640 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms