RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.39
VANGL1-203ENST00000369509 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.39
VANGL1-203ENST00000369509 ZNF174Q15697 407 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 INF2Q27J81 1249 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 C4orf32Q8N8J7 132 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 AMNQ9BXJ7 453 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.39
VANGL1-203ENST00000369509 FBXO28Q9NVF7 368 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 TMEM260Q9NX78 707 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 PCDHA1Q9Y5I3 950 aa12.65□□□□□ -0.39
VANGL1-203ENST00000369509 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 PFKFB1P16118 471 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 MTMR2Q13614 643 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
VANGL1-203ENST00000369509 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 FBXO11Q86XK2 927 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
VANGL1-203ENST00000369509 CHURC1Q8WUH1 139 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 CUL5Q93034 780 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
VANGL1-203ENST00000369509 FEM1BQ9UK73 627 aa12.64□□□□□ -0.39
VANGL1-203ENST00000369509 OPLAHO14841 1288 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 EDIL3O43854 480 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 PTGDRQ13258 359 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 UBE2SQ16763 222 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.63□□□□□ -0.39
VANGL1-203ENST00000369509 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
VANGL1-203ENST00000369509 VCAM1P19320 739 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 MCM7P33993 719 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 TERF1P54274 439 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 BACE1P56817 501 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 SPP2Q13103 211 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 TBCKQ8TEA7 893 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 C12orf42Q96LP6 360 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 AS3MTQ9HBK9 375 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 SNCAIPQ9Y6H5 919 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 A0A0G2JMZ2 1700 aa12.63□□□□□ -0.39
VANGL1-203ENST00000369509 MEIS2O14770 477 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
VANGL1-203ENST00000369509 USP14P54578 494 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 VGLL4Q14135 290 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 CAMK4Q16566 473 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 CDCA5Q96FF9 252 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
VANGL1-203ENST00000369509 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
VANGL1-203ENST00000369509 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
VANGL1-203ENST00000369509 PRKG1Q13976 671 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 IL17AQ16552 155 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USH1GQ495M9 461 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
VANGL1-203ENST00000369509 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ZHX2Q9Y6X8 837 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ZNF536O15090 1300 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ZNF202O95125 648 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ADCY5O95622 1261 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ORC2Q13416 577 aaPredicted RBP12.61□□□□□ -0.39
VANGL1-203ENST00000369509 SPECC1Q5M775 1068 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 ARL6IP4Q66PJ3 421 aaKnown RBP12.61□□□□□ -0.39
VANGL1-203ENST00000369509 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
VANGL1-203ENST00000369509 TPM3P06753 285 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 PRPF38AQ8NAV1 312 aaKnown RBP12.6□□□□□ -0.39
VANGL1-203ENST00000369509 RPAP3Q9H6T3 665 aaPredicted RBP12.6□□□□□ -0.39
VANGL1-203ENST00000369509 PIK3CDO00329 1044 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 LAD1O00515 517 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 CTAGE5O15320 804 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 PPP1R12BO60237 982 aaPredicted RBP12.6□□□□□ -0.39
VANGL1-203ENST00000369509 SYKP43405 635 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 HMGCS2P54868 508 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
VANGL1-203ENST00000369509 PNMA8AQ86V59 439 aaPredicted RBP12.6□□□□□ -0.39
VANGL1-203ENST00000369509 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms