RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 GLT8D2Q9H1C3 349 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 BIN2Q9UBW5 565 aaPredicted RBP18.19■□□□□ 0.5
LMNA-203ENST00000368297 CCPG1Q9ULG6 757 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 ABCB11O95342 1321 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 VWA5AO00534 786 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 ICAM1P05362 532 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 NOM1Q5C9Z4 860 aaKnown RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 RILPL1Q5EBL4 403 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 JAKMIP3Q5VZ66 844 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 KRT25Q7Z3Z0 450 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 M0R2N6 131 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 UBE2HP62256 183 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 IRX3P78415 501 aaPredicted RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.55e-12■□□□□ 8.9
LMNA-203ENST00000368297 UBE2SQ16763 222 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
LMNA-203ENST00000368297 AGBL1Q96MI9 1066 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 TMEM260Q9NX78 707 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 AGTPBP1Q9UPW5 1226 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 CLIC4Q9Y696 253 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 RLFQ13129 1914 aa18.18■□□□□ 0.5
LMNA-203ENST00000368297 GTF2A2P52657 109 aa18.17■□□□□ 0.5
LMNA-203ENST00000368297 STK38Q15208 465 aa18.17■□□□□ 0.5
LMNA-203ENST00000368297 LEO1Q8WVC0 666 aaPredicted RBP18.17■□□□□ 0.5
LMNA-203ENST00000368297 RTEL1Q9NZ71 1219 aa18.17■□□□□ 0.5
LMNA-203ENST00000368297 PNMA2Q9UL42 364 aa18.17■□□□□ 0.5
LMNA-203ENST00000368297 ZNF536O15090 1300 aa18.17■□□□□ 0.5
LMNA-203ENST00000368297 CETPP11597 493 aa18.16■□□□□ 0.5
LMNA-203ENST00000368297 ALAS1P13196 640 aa18.16■□□□□ 0.5
LMNA-203ENST00000368297 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
LMNA-203ENST00000368297 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNA-203ENST00000368297 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
LMNA-203ENST00000368297 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
LMNA-203ENST00000368297 POLR3EQ9NVU0 708 aa18.16■□□□□ 0.5
LMNA-203ENST00000368297 COL11A1P12107 1806 aaPredicted RBP18.16■□□□□ 0.5
LMNA-203ENST00000368297 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 OSBPP22059 807 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 YY1P25490 414 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 ZNF157P51786 506 aaPredicted RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 MOGSQ13724 837 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 ELP1O95163 1332 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 CCL15-CCL14A0A0B4J2E2 113 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 TOMM70O94826 608 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 YEATS4O95619 227 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 CCL15Q16663 113 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 INF2Q27J81 1249 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 TTC38Q5R3I4 469 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 ASCC2Q9H1I8 757 aaPredicted RBP18.15■□□□□ 0.5
LMNA-203ENST00000368297 RCOR1Q9UKL0 485 aa18.15■□□□□ 0.5
LMNA-203ENST00000368297 CFBP00751 764 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 TRAPPC10P48553 1259 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 NASPP49321 788 aaPredicted RBP18.14■□□□□ 0.49
LMNA-203ENST00000368297 CLK2P49760 499 aaKnown RBP18.14■□□□□ 0.49
LMNA-203ENST00000368297 OAZ1P54368 228 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 PLS1Q14651 629 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 GPAT2Q6NUI2 795 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
LMNA-203ENST00000368297 HOMER2Q9NSB8 354 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 PCDHB6Q9Y5E3 794 aa18.14■□□□□ 0.49
LMNA-203ENST00000368297 GOLGA6L4A6NEF3 574 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 OPLAHO14841 1288 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 GADD45BO75293 160 aaPredicted RBP18.13■□□□□ 0.49
LMNA-203ENST00000368297 MCTP2Q6DN12 878 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
LMNA-203ENST00000368297 SAPCD2Q86UD0 394 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 LINC00301Q8NCQ3 95 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 REPS2Q8NFH8 660 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
LMNA-203ENST00000368297 SMCHD1A6NHR9 2005 aa18.13■□□□□ 0.49
LMNA-203ENST00000368297 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
LMNA-203ENST00000368297 MEIS2O14770 477 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 SPTLC2O15270 562 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 HOXA13P31271 388 aaPredicted RBP18.12■□□□□ 0.49
LMNA-203ENST00000368297 ZNF445P59923 1031 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 AP3B2Q13367 1082 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 TMEM132BQ14DG7 1078 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 ZNF174Q15697 407 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 ZSCAN23Q3MJ62 389 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 RGMBQ6NW40 437 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 RASAL3Q86YV0 1011 aa18.12■□□□□ 0.49
LMNA-203ENST00000368297 KCNG4Q8TDN1 519 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms