RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 ELP1O95163 1332 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 ZBTB5O15062 677 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 FIBPO43427 364 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 PLA2G6O60733 806 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
VTA1-201ENST00000367621 KRT85P78386 507 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 DGKZQ13574 1117 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 FAM83BQ5T0W9 1011 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 SYDE2Q5VT97 1194 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 HEATR3Q7Z4Q2 680 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
VTA1-201ENST00000367621 DAGLBQ8NCG7 672 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 PGBD1Q96JS3 809 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 ANP32EQ9BTT0 268 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
VTA1-201ENST00000367621 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 WNT7AO00755 349 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 XBP1P17861 261 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
VTA1-201ENST00000367621 PTMSP20962 102 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 KRT2P35908 639 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 PRKG1Q13976 671 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 PTPAQ15257 358 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
VTA1-201ENST00000367621 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 PNMA8AQ86V59 439 aaPredicted RBP10.91□□□□□ -0.66
VTA1-201ENST00000367621 LINC00301Q8NCQ3 95 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 COA7Q96BR5 231 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 ZNF396Q96N95 335 aaPredicted RBP10.91□□□□□ -0.66
VTA1-201ENST00000367621 SCAND2PQ9GZW5 306 aaPredicted RBP10.91□□□□□ -0.66
VTA1-201ENST00000367621 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 PCDHA4Q9UN74 947 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 SNCAIPQ9Y6H5 919 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 WDR90Q96KV7 1748 aa10.91□□□□□ -0.66
VTA1-201ENST00000367621 ESYT2A0FGR8 921 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 hCG_1984214I3L0E3 225 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 RAD21O60216 631 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 NLRP5P59047 1200 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 SNAP25P60880 206 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 SPP2Q13103 211 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 VGLL4Q14135 290 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 ZYXQ15942 572 aaKnown RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 KLHL40Q2TBA0 621 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 ANO1Q5XXA6 986 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 GALNT17Q6IS24 598 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 MOB2Q70IA6 237 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 BLIDQ8IZY5 108 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 ZNF713Q8N859 430 aaPredicted RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 SPATA32Q96LK8 384 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 RRAGCQ9HB90 399 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 SEC63Q9UGP8 760 aaKnown RBP10.9□□□□□ -0.66
VTA1-201ENST00000367621 CFAP45Q9UL16 551 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 PRR12Q9ULL5 1215 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 PCDHA6Q9UN73 950 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 AFG3L2Q9Y4W6 797 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 PCDHA8Q9Y5H6 950 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 ZHX2Q9Y6X8 837 aa10.9□□□□□ -0.66
VTA1-201ENST00000367621 SMCO2A6NFE2 343 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 EDIL3O43854 480 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 CALML3P27482 149 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 NAPAP54920 295 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 BACE1P56817 501 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 UBE2HP62256 183 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 FMR1Q06787 632 aaKnown RBP eCLIP10.89□□□□□ -0.67
VTA1-201ENST00000367621 MTMR2Q13614 643 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 SKOR2Q2VWA4 1001 aaPredicted RBP10.89□□□□□ -0.67
VTA1-201ENST00000367621 PPP1R18Q6NYC8 613 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 ZNF280CQ8ND82 737 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 CCDC148Q8NFR7 591 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 RASGRP4Q8TDF6 673 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 LPAR1Q92633 364 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
VTA1-201ENST00000367621 PICK1Q9NRD5 415 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 FEM1BQ9UK73 627 aa10.89□□□□□ -0.67
VTA1-201ENST00000367621 TRAF5O00463 557 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 OPLAHO14841 1288 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 WDR46O15213 610 aaKnown RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 YEATS4O95619 227 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 VCAM1P19320 739 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 STAT2P52630 851 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 SF3A1Q15459 793 aaKnown RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 AXDND1Q5T1B0 1012 aaPredicted RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 MAP1SQ66K74 1059 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms