RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 MAP3K13O43283 966 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 CA12O43570 354 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 TTLL1O95922 423 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 GNA11P29992 359 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 CDC25BP30305 580 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 NOVP48745 357 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 ZNF75DP51815 510 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 NPY5RQ15761 445 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 AOPEPQ8N6M6 819 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 ERCC4Q92889 916 aaPredicted RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.432e-8■■□□□ 11.7
H3F3A-202ENST00000366814 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 DDX4Q9NQI0 724 aaKnown RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
H3F3A-202ENST00000366814 AP5Z1O43299 807 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 USP2O75604 605 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-202ENST00000366814 NAPAP54920 295 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-202ENST00000366814 ZNF174Q15697 407 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 LONRF3Q496Y0 759 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 DHX40Q8IX18 779 aaKnown RBP12.37□□□□□ -0.43
H3F3A-202ENST00000366814 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 SPC24Q8NBT2 197 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
H3F3A-202ENST00000366814 BIN1O00499 593 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 TXLNAP40222 546 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 PTGDRQ13258 359 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 PNOCQ13519 176 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 POSTNQ15063 836 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 DPCR1Q3MIW9 517 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 EARS2Q5JPH6 523 aaKnown RBP12.36□□□□□ -0.43
H3F3A-202ENST00000366814 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 FKBP1CQ5VVH2 108 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
H3F3A-202ENST00000366814 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 TEPSINQ96N21 525 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
H3F3A-202ENST00000366814 STXBP3O00186 592 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
H3F3A-202ENST00000366814 CYTH3O43739 400 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 SMC2O95347 1197 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 GOLGA8HP0CJ92 632 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 AKR1B1P15121 316 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 PSEN1P49768 467 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 TCP10Q12799 353 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 METTL16Q86W50 562 aaKnown RBP12.36□□□□□ -0.43
H3F3A-202ENST00000366814 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 TRIML1Q8N9V2 468 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
H3F3A-202ENST00000366814 CASP8AP2Q9UKL3 1982 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 IKBKBO14920 756 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 TRPA1O75762 1119 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 PDHBP11177 359 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 MCM7P33993 719 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-202ENST00000366814 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-202ENST00000366814 ANKRD13AQ8IZ07 590 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 RNF186Q9NXI6 227 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.35□□□□□ -0.43
H3F3A-202ENST00000366814 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
H3F3A-202ENST00000366814 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 LAD1O00515 517 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 SHMT1P34896 483 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 GRIN1Q05586 938 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 GPATCH4Q5T3I0 446 aaKnown RBP12.34□□□□□ -0.43
H3F3A-202ENST00000366814 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 PDILTQ8N807 584 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 FAM151AQ8WW52 585 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 PCDHA5Q9Y5H7 936 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
H3F3A-202ENST00000366814 NFIAQ12857 509 aa12.34□□□□□ -0.43
H3F3A-202ENST00000366814 DHX8Q14562 1220 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms