RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NEK8Q86SG6 692 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 SPDL1Q96EA4 605 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 ADPGKQ9BRR6 497 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 CCDC68Q9H2F9 335 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 HOMER3Q9NSC5 361 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 MGEA5O60502 916 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 BCAMP50895 628 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 MYL7Q01449 175 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 FBXO11Q86XK2 927 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 LRRIQ4A6NIV6 560 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 S100BP04271 92 aaPredicted RBP20.1■□□□□ 0.81
SHANK1-202ENST00000359082 ATXN8OSP0DMR3 200 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 PHLDB3Q6NSJ2 640 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 PLA2G4DQ86XP0 818 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 GOLGA5Q8TBA6 731 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 CHMP6Q96FZ7 201 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 DISC1Q9NRI5 854 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 HESX1Q9UBX0 185 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 CLIC4Q9Y696 253 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 USH1CQ9Y6N9 552 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 A0A0D9SFI3 127 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 APBA3O96018 575 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 PRPSAP1Q14558 356 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-202ENST00000359082 WHAMMQ8TF30 809 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 LRGUKQ96M69 825 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 A6NJR5 290 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 CFAP61Q8NHU2 1237 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 SYMPKQ92797 1274 aaKnown RBP20.09■□□□□ 0.81
SHANK1-202ENST00000359082 BCL2L12Q9HB09 334 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 TSC1Q92574 1164 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 MAGED2Q9UNF1 606 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-202ENST00000359082 BTDP43251 543 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 RAPH1Q70E73 1250 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 ZNF274Q96GC6 653 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-202ENST00000359082 ZNF148Q9UQR1 794 aa20.09■□□□□ 0.81
SHANK1-202ENST00000359082 SGK1O00141 431 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 YWHAGP61981 247 aaKnown RBP eCLIP20.08■□□□□ 0.81
SHANK1-202ENST00000359082 ZSCAN26Q16670 478 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 POC1B-GALNT4F8VUJ3 575 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 HAUS8Q9BT25 410 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 EDC4Q6P2E9 1401 aaKnown RBP20.08■□□□□ 0.81
SHANK1-202ENST00000359082 STMN1P16949 149 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 RASSF7Q02833 373 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
SHANK1-202ENST00000359082 CHL1O00533 1208 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 USP28Q96RU2 1077 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 LRRC8CQ8TDW0 803 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 CSRNP1Q96S65 589 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 IPO11Q9UI26 975 aaKnown RBP20.08■□□□□ 0.8
SHANK1-202ENST00000359082 TPCN1Q9ULQ1 816 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 PCDHB4Q9Y5E5 795 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 SPECC1L-ADORA2AF8WAN1 911 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.8
SHANK1-202ENST00000359082 PNMA1Q8ND90 353 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 ORAI2Q96SN7 254 aa20.08■□□□□ 0.8
SHANK1-202ENST00000359082 PFDN6O15212 129 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 SCG2P13521 617 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
SHANK1-202ENST00000359082 FANCLQ9NW38 375 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 BAG5Q9UL15 447 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 KLRF2D3W0D1 207 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 ANAPC5Q9UJX4 755 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 TNKSO95271 1327 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
SHANK1-202ENST00000359082 MED23Q9ULK4 1368 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 NDUFA8P51970 172 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 SDCCAG3Q96C92 435 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 VGLL3A8MV65 326 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 INPP1P49441 399 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 TMTC4Q5T4D3 741 aa20.07■□□□□ 0.8
SHANK1-202ENST00000359082 GTPBP6O43824 516 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 EIF4A1P60842 406 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 MCUQ8NE86 351 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 MRPL46Q9H2W6 279 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 KIF9Q9HAQ2 790 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 BCS1LQ9Y276 419 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 ARHGAP4P98171 946 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 Q9H521 79 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 TLR3O15455 904 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 MAP2K2P36507 400 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 UBXN2AP68543 259 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 CYP4A11Q02928 519 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 TESK2Q96S53 571 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 ADCY9O60503 1353 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 TPX2Q9ULW0 747 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 HIP1RO75146 1068 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 ADD1P35611 737 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 NSFP46459 744 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
SHANK1-202ENST00000359082 MESDQ14696 234 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 LRRC8AQ8IWT6 810 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms