RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ATP2B2Q01814 1243 aa22.91■■□□□ 1.26
COL13A1-202ENST00000357811 LACRTQ9GZZ8 138 aa22.91■■□□□ 1.26
COL13A1-202ENST00000357811 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
COL13A1-202ENST00000357811 HERVK_113P62684 666 aa22.91■■□□□ 1.26
COL13A1-202ENST00000357811 BEND6Q5SZJ8 279 aaPredicted RBP22.91■■□□□ 1.26
COL13A1-202ENST00000357811 TTI2Q6NXR4 508 aa22.91■■□□□ 1.26
COL13A1-202ENST00000357811 DUSP9Q99956 384 aaKnown RBP22.91■■□□□ 1.26
COL13A1-202ENST00000357811 PYM1Q9BRP8 204 aaKnown RBP22.91■■□□□ 1.26
COL13A1-202ENST00000357811 VPS18Q9P253 973 aa22.91■■□□□ 1.26
COL13A1-202ENST00000357811 SRCAPQ6ZRS2 3230 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 LMAN1P49257 510 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 MRPS25P82663 173 aaKnown RBP22.9■■□□□ 1.26
COL13A1-202ENST00000357811 KRT26Q7Z3Y9 468 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 CCDC148Q8NFR7 591 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 EXOC1Q9NV70 894 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
COL13A1-202ENST00000357811 BAG3O95817 575 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 PLEKP08567 350 aaPredicted RBP22.9■■□□□ 1.26
COL13A1-202ENST00000357811 TBCKQ8TEA7 893 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 CNOT6LQ96LI5 555 aaKnown RBP22.9■■□□□ 1.26
COL13A1-202ENST00000357811 KBTBD4Q9NVX7 518 aa22.9■■□□□ 1.26
COL13A1-202ENST00000357811 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 F8W031 263 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-202ENST00000357811 ZNF185O15231 689 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 CDK8P49336 464 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 PICALMQ13492 652 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 GIMAP8Q8ND71 665 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-202ENST00000357811 SMCR8Q8TEV9 937 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-202ENST00000357811 COA7Q96BR5 231 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 CEP95Q96GE4 821 aa22.89■■□□□ 1.26
COL13A1-202ENST00000357811 OR52Z1P0C646 297 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 TEX11Q8IYF3 940 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 CCDC66A2RUB6 948 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 SLURP2P0DP57 97 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 ZNF507Q8TCN5 953 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 CCDC102AQ96A19 550 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 PSMB7Q99436 277 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 TRIM9Q9C026 710 aa22.89■■□□□ 1.25
COL13A1-202ENST00000357811 SCN7AQ01118 1682 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 PALM3A6NDB9 673 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-202ENST00000357811 USP17L5A8MUK1 530 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 GNAQP50148 359 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 BRD3Q15059 726 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 LRRC47Q8N1G4 583 aaKnown RBP22.88■■□□□ 1.25
COL13A1-202ENST00000357811 WDR66Q8TBY9 1149 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 MMS19Q96T76 1030 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 NOC4LQ9BVI4 516 aaKnown RBP22.88■■□□□ 1.25
COL13A1-202ENST00000357811 SH3GLB2Q9NR46 395 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 FAM207AQ9NSI2 230 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-202ENST00000357811 RHOBTB3O94955 611 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 IDEP14735 1019 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 FECHP22830 423 aa22.88■■□□□ 1.25
COL13A1-202ENST00000357811 GSPT2Q8IYD1 628 aaKnown RBP22.88■■□□□ 1.25
COL13A1-202ENST00000357811 RASSF10A6NK89 507 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 RAD21O60216 631 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 RFC4P35249 363 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 TRIM14Q14142 442 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 NONOQ15233 471 aaKnown RBP eCLIP22.87■■□□□ 1.25
COL13A1-202ENST00000357811 NGLY1Q96IV0 654 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 UBXN6Q9BZV1 441 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 ADAM21Q9UKJ8 722 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 FLT1P17948 1338 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 UFL1O94874 794 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 SOGA3Q5TF21 947 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 P2RX5Q93086 422 aa22.87■■□□□ 1.25
COL13A1-202ENST00000357811 POTEMA6NI47 508 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 LRRC41Q15345 812 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 SEC63Q9UGP8 760 aaKnown RBP22.86■■□□□ 1.25
COL13A1-202ENST00000357811 GLIS3Q8NEA6 775 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 CCSER1Q9C0I3 900 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 NHEJ1Q9H9Q4 299 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-202ENST00000357811 CAPN11Q9UMQ6 739 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 PDS5AQ29RF7 1337 aaKnown RBP22.86■■□□□ 1.25
COL13A1-202ENST00000357811 EEF1GP26641 437 aaKnown RBP22.86■■□□□ 1.25
COL13A1-202ENST00000357811 AMPD2Q01433 879 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 JAKMIP2Q96AA8 810 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 GPCPD1Q9NPB8 672 aa22.86■■□□□ 1.25
COL13A1-202ENST00000357811 ATP8B1O43520 1251 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 GPSM2P81274 684 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 NEK8Q86SG6 692 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 THAP9Q9H5L6 903 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 EPHB6O15197 1021 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 TDP2O95551 362 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 TNNT3P45378 269 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-202ENST00000357811 DNM2P50570 870 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 KIAA0895Q8NCT3 520 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 RRP36Q96EU6 259 aaKnown RBP22.85■■□□□ 1.25
COL13A1-202ENST00000357811 DNAJC7Q99615 494 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 RTFDC1Q9BY42 306 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-202ENST00000357811 JADE2Q9NQC1 790 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 FAN1Q9Y2M0 1017 aa22.85■■□□□ 1.25
COL13A1-202ENST00000357811 MAP2K7O14733 419 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 IRX5P78411 483 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-202ENST00000357811 KCNB1Q14721 858 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 WHAMMP3Q1A5X7 153 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 HDXQ7Z353 690 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 CCDC155Q8N6L0 562 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 ANKRD13CQ8N6S4 541 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms